RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 TMEM170BQ5T4T1 132 aa5.95□□□□□ -1.46
VPS13B-206ENST00000496144 GTSF1LQ9H1H1 148 aa5.95□□□□□ -1.46
VPS13B-206ENST00000496144 VCX2Q9H322 139 aa5.95□□□□□ -1.46
VPS13B-206ENST00000496144 Q9UF83 564 aa5.95□□□□□ -1.46
VPS13B-206ENST00000496144 MRPS36P82909 103 aaKnown RBP5.94□□□□□ -1.46
VPS13B-206ENST00000496144 IGHV3-38A0A0C4DH36 116 aa5.94□□□□□ -1.46
VPS13B-206ENST00000496144 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
VPS13B-206ENST00000496144 LGALS3P17931 250 aaKnown RBP5.94□□□□□ -1.46
VPS13B-206ENST00000496144 COTL1Q14019 142 aa5.94□□□□□ -1.46
VPS13B-206ENST00000496144 NIPBLQ6KC79 2804 aaeCLIP5.94□□□□□ -1.462e-7■■■□□ 16.1
VPS13B-206ENST00000496144 NAA38Q9BRA0 125 aaKnown RBP5.93□□□□□ -1.46
VPS13B-206ENST00000496144 MAP1AP78559 2803 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-206ENST00000496144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-206ENST00000496144 IGKV2-29A2NJV5 120 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-206ENST00000496144 FABP2P12104 132 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 ZNF479Q96JC4 524 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 J3QQQ9 107 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 LELP1Q5T871 98 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 UBE2WQ96B02 151 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 FAM19A3Q7Z5A8 133 aa5.93□□□□□ -1.46
VPS13B-206ENST00000496144 SCGB1D4Q6XE38 83 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 NF1P21359 2839 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 NACAE9PAV3 2078 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 TRBV6-4A0A1B0GX49 114 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 MALP21145 153 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 TIMM21Q9BVV7 248 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 Q6ZUT4 128 aa5.92□□□□□ -1.46
VPS13B-206ENST00000496144 DAZ4Q86SG3 579 aaKnown RBP5.92□□□□□ -1.46
VPS13B-206ENST00000496144 DAZ3Q9NR90 486 aaKnown RBP5.92□□□□□ -1.46
VPS13B-206ENST00000496144 A0A0J9YXV3 536 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 A6NJY4 79 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 ANGP03950 147 aaKnown RBP5.91□□□□□ -1.46
VPS13B-206ENST00000496144 UBE2D1P51668 147 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 TRBV10-1A0A0K0K1A3 114 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 SLC25A29Q8N8R3 303 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 NBEAL1Q6ZS30 2694 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 UBE2D3P61077 147 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 UBE2D2P62837 147 aa5.91□□□□□ -1.46
VPS13B-206ENST00000496144 IGKV3OR2-268A0A0C4DH90 116 aa5.9□□□□□ -1.46
VPS13B-206ENST00000496144 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.46
VPS13B-206ENST00000496144 C7orf33Q8WU49 177 aa5.9□□□□□ -1.46
VPS13B-206ENST00000496144 TMEM243Q9BU79 118 aa5.9□□□□□ -1.47
VPS13B-206ENST00000496144 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 IGHV1-58A0A0C4DH39 117 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS13B-206ENST00000496144 UPK3BQ9BT76 320 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 MXRA5Q9NR99 2828 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 IGLV5-45A0A087WSX0 123 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 LYPD5Q6UWN5 251 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 AGRNO00468 2067 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 APOMO95445 188 aa5.89□□□□□ -1.47
VPS13B-206ENST00000496144 TSPAN13O95857 204 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 TIRAPP58753 221 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 SS18Q15532 418 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
VPS13B-206ENST00000496144 H7C423 109 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 NTM-AS1Q6ZSK4 140 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 ESRGQ1W209 222 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 VSIG2Q96IQ7 327 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 SPINK8P0C7L1 97 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 RBX1P62877 108 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 LITAFQ99732 161 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 SPANXDQ9BXN6 97 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 SPANXCQ9NY87 97 aa5.88□□□□□ -1.47
VPS13B-206ENST00000496144 CFC1BP0CG36 223 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 CFC1P0CG37 223 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 TMEM238C9JI98 176 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 COX6A2Q02221 97 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 LINC00612Q8N6U2 182 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 FHL2Q14192 279 aa5.87□□□□□ -1.47
VPS13B-206ENST00000496144 HERVK_113P63121 156 aa5.86□□□□□ -1.47
VPS13B-206ENST00000496144 GAGE6Q13070 117 aa5.86□□□□□ -1.47
VPS13B-206ENST00000496144 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
VPS13B-206ENST00000496144 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
VPS13B-206ENST00000496144 RPL24P83731 157 aaKnown RBP5.86□□□□□ -1.47
VPS13B-206ENST00000496144 LOC100131303A0A0U1RQF7 123 aa5.86□□□□□ -1.47
VPS13B-206ENST00000496144 A0A0B4J2C4 111 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 F8W1H4 67 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 EIF4EBP3O60516 100 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-206ENST00000496144 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 GEMIN7Q9H840 131 aaKnown RBP5.85□□□□□ -1.47
VPS13B-206ENST00000496144 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 NDUFA1O15239 70 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 CBY1Q9Y3M2 126 aa5.85□□□□□ -1.47
VPS13B-206ENST00000496144 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-206ENST00000496144 LINC01556Q5JQF7 62 aa5.84□□□□□ -1.47
VPS13B-206ENST00000496144 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
VPS13B-206ENST00000496144 TIMM17BO60830 172 aa5.84□□□□□ -1.47
VPS13B-206ENST00000496144 INAFM2P0DMQ5 153 aa5.84□□□□□ -1.47
VPS13B-206ENST00000496144 LINC00242Q5T6M2 205 aa5.84□□□□□ -1.47
VPS13B-206ENST00000496144 MIAQ16674 131 aa5.84□□□□□ -1.48
VPS13B-206ENST00000496144 NDUFA12Q9UI09 145 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms