RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
CHTOP-206ENST00000495554 LOC107984156A0A0G2JMH3 177 aa10.57□□□□□ -0.72
CHTOP-206ENST00000495554 ARL17AQ8IVW1 177 aa10.57□□□□□ -0.72
CHTOP-206ENST00000495554 INAFM1C9JVW0 142 aa10.57□□□□□ -0.72
CHTOP-206ENST00000495554 PRO0461Q9UI25 63 aa10.57□□□□□ -0.72
CHTOP-206ENST00000495554 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
CHTOP-206ENST00000495554 NSD1Q96L73 2696 aaPredicted RBP10.56□□□□□ -0.72
CHTOP-206ENST00000495554 C2CD3Q4AC94 2353 aa10.56□□□□□ -0.72
CHTOP-206ENST00000495554 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
CHTOP-206ENST00000495554 HIVEP1P15822 2718 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 Q6Q795 121 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 MUSTN1Q8IVN3 82 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
CHTOP-206ENST00000495554 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
CHTOP-206ENST00000495554 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
CHTOP-206ENST00000495554 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
CHTOP-206ENST00000495554 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.54□□□□□ -0.72
CHTOP-206ENST00000495554 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
CHTOP-206ENST00000495554 LITAFQ99732 161 aa10.54□□□□□ -0.72
CHTOP-206ENST00000495554 PSMB2P49721 201 aa10.53□□□□□ -0.72
CHTOP-206ENST00000495554 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
CHTOP-206ENST00000495554 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
CHTOP-206ENST00000495554 TRGV2A0A075B6R0 118 aa10.53□□□□□ -0.72
CHTOP-206ENST00000495554 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
CHTOP-206ENST00000495554 HERVK_113P63121 156 aa10.52□□□□□ -0.73
CHTOP-206ENST00000495554 LINC00482Q8N8I6 264 aa10.52□□□□□ -0.73
CHTOP-206ENST00000495554 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
CHTOP-206ENST00000495554 VWFP04275 2813 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 A8MZ25 164 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 SPANXDQ9BXN6 97 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 SPANXCQ9NY87 97 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 TRBV6-4A0A1B0GX49 114 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
CHTOP-206ENST00000495554 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
CHTOP-206ENST00000495554 PRSS2P07478 247 aa10.5□□□□□ -0.73
CHTOP-206ENST00000495554 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
CHTOP-206ENST00000495554 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
CHTOP-206ENST00000495554 CRLF1O75462 422 aa10.5□□□□□ -0.73
CHTOP-206ENST00000495554 SPATA3Q8NHX4 192 aa10.5□□□□□ -0.73
CHTOP-206ENST00000495554 TCL1BO95988 128 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 PF4P02776 101 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 COX6A2Q02221 97 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 MIAQ16674 131 aa10.49□□□□□ -0.73
CHTOP-206ENST00000495554 NDUFA1O15239 70 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 TIMM17BO60830 172 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 Q5XG85 94 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 CDC42SE2Q9NRR3 84 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
CHTOP-206ENST00000495554 TRGV4A0A0C4DH28 118 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 TMEM262E9PQX1 116 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 UBE2L6O14933 153 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
CHTOP-206ENST00000495554 TRAV13-1A0A0B4J241 112 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 SNCGO76070 127 aa10.47□□□□□ -0.73
CHTOP-206ENST00000495554 H7C423 109 aa10.46□□□□□ -0.74
CHTOP-206ENST00000495554 H7C2G1 150 aa10.45□□□□□ -0.74
CHTOP-206ENST00000495554 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
CHTOP-206ENST00000495554 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
CHTOP-206ENST00000495554 Q1RN00 199 aa10.45□□□□□ -0.74
CHTOP-206ENST00000495554 FHL2Q14192 279 aa10.44□□□□□ -0.74
CHTOP-206ENST00000495554 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
CHTOP-206ENST00000495554 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
CHTOP-206ENST00000495554 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
CHTOP-206ENST00000495554 CARD19Q96LW7 228 aa10.43□□□□□ -0.74
CHTOP-206ENST00000495554 Q9H8V8 135 aa10.43□□□□□ -0.74
CHTOP-206ENST00000495554 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
CHTOP-206ENST00000495554 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
CHTOP-206ENST00000495554 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
CHTOP-206ENST00000495554 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
CHTOP-206ENST00000495554 NPC2P61916 151 aa10.41□□□□□ -0.74
CHTOP-206ENST00000495554 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
CHTOP-206ENST00000495554 C9orf153Q5TBE3 101 aa10.41□□□□□ -0.74
CHTOP-206ENST00000495554 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
CHTOP-206ENST00000495554 ATRQ13535 2644 aa10.4□□□□□ -0.74
CHTOP-206ENST00000495554 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
CHTOP-206ENST00000495554 DAND5Q8N907 189 aa10.4□□□□□ -0.74
CHTOP-206ENST00000495554 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
CHTOP-206ENST00000495554 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 DEFB130BP0DP73 79 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 DEFB130AP0DP74 79 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 LINC00612Q8N6U2 182 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 TRRAPQ9Y4A5 3859 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 TRIAP1O43715 76 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
CHTOP-206ENST00000495554 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
CHTOP-206ENST00000495554 TEP1Q99973 2627 aaKnown RBP10.39□□□□□ -0.75
CHTOP-206ENST00000495554 PRIMA1Q86XR5 153 aa10.38□□□□□ -0.75
CHTOP-206ENST00000495554 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
CHTOP-206ENST00000495554 SLC25A20O43772 301 aa10.38□□□□□ -0.75
CHTOP-206ENST00000495554 C9orf66Q5T8R8 295 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms