RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 TENM3Q9P273 2699 aa13.83□□□□□ -0.19
LINC01558-202ENST00000495520 GCSHP23434 173 aa13.83□□□□□ -0.2
LINC01558-202ENST00000495520 RBX1P62877 108 aa13.83□□□□□ -0.2
LINC01558-202ENST00000495520 HIST1H4GQ99525 98 aa13.82□□□□□ -0.2
LINC01558-202ENST00000495520 COX11Q9Y6N1 276 aa13.82□□□□□ -0.2
LINC01558-202ENST00000495520 HUWE1Q7Z6Z7 4374 aaKnown RBP13.82□□□□□ -0.2
LINC01558-202ENST00000495520 LELP1Q5T871 98 aa13.81□□□□□ -0.2
LINC01558-202ENST00000495520 ZFAND6Q6FIF0 208 aa13.81□□□□□ -0.2
LINC01558-202ENST00000495520 Q6ZTC4 211 aa13.81□□□□□ -0.2
LINC01558-202ENST00000495520 C10orf126Q8N4M7 172 aa13.81□□□□□ -0.2
LINC01558-202ENST00000495520 SMIM1B2RUZ4 78 aa13.8□□□□□ -0.2
LINC01558-202ENST00000495520 DNAH9Q9NYC9 4486 aa13.8□□□□□ -0.2
LINC01558-202ENST00000495520 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
LINC01558-202ENST00000495520 K7EP13 123 aa13.79□□□□□ -0.2
LINC01558-202ENST00000495520 Q6ZVH6 145 aa13.79□□□□□ -0.2
LINC01558-202ENST00000495520 NHLRC4P0CG21 123 aaPredicted RBP13.79□□□□□ -0.2
LINC01558-202ENST00000495520 A0A0J9YXY3 114 aa13.78□□□□□ -0.2
LINC01558-202ENST00000495520 LINC00959A0A1B0GUT2 108 aa13.78□□□□□ -0.2
LINC01558-202ENST00000495520 C11orf45Q8TAV5 145 aa13.78□□□□□ -0.2
LINC01558-202ENST00000495520 NDUFA12Q9UI09 145 aa13.78□□□□□ -0.2
LINC01558-202ENST00000495520 IGHV3OR16-9A0A0B4J2B5 98 aa13.77□□□□□ -0.21
LINC01558-202ENST00000495520 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
LINC01558-202ENST00000495520 CCL25O15444 150 aa13.76□□□□□ -0.21
LINC01558-202ENST00000495520 NANOS2P60321 138 aaKnown RBP13.76□□□□□ -0.21
LINC01558-202ENST00000495520 LYPD5Q6UWN5 251 aa13.76□□□□□ -0.21
LINC01558-202ENST00000495520 PTTG1IPP53801 180 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 SRSF9Q13242 221 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC01558-202ENST00000495520 NDUFA1O15239 70 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 IGHV3-30P01768 117 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 IGHV3-30-5P0DP03 117 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 LITAFQ99732 161 aa13.75□□□□□ -0.21
LINC01558-202ENST00000495520 PRKDCP78527 4128 aaKnown RBP13.74□□□□□ -0.21
LINC01558-202ENST00000495520 A0A087WZ39 114 aa13.73□□□□□ -0.21
LINC01558-202ENST00000495520 COL7A1Q02388 2944 aa13.73□□□□□ -0.21
LINC01558-202ENST00000495520 IGKV3OR2-268A0A0C4DH90 116 aa13.72□□□□□ -0.21
LINC01558-202ENST00000495520 C9orf118A6NHY6 69 aa13.72□□□□□ -0.21
LINC01558-202ENST00000495520 TMEM238C9JI98 176 aa13.72□□□□□ -0.21
LINC01558-202ENST00000495520 TIMM17BO60830 172 aa13.72□□□□□ -0.21
LINC01558-202ENST00000495520 NHP2Q9NX24 153 aaKnown RBP13.72□□□□□ -0.21
LINC01558-202ENST00000495520 DEFB131BA0A096LNP1 70 aa13.71□□□□□ -0.21
LINC01558-202ENST00000495520 SS18Q15532 418 aa13.71□□□□□ -0.21
LINC01558-202ENST00000495520 LINC01561Q8N1V8 128 aa13.7□□□□□ -0.22
LINC01558-202ENST00000495520 ZNF625Q96I27 306 aaPredicted RBP13.7□□□□□ -0.22
LINC01558-202ENST00000495520 LINC00269Q8N2A0 174 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 Q8N3U1 123 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 TMEM238LA0A1B0GVL6 79 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 A6NJY4 79 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 K7ERJ3 54 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 SPANXDQ9BXN6 97 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 SPANXCQ9NY87 97 aa13.69□□□□□ -0.22
LINC01558-202ENST00000495520 REG3AQ06141 175 aa13.67□□□□□ -0.22
LINC01558-202ENST00000495520 ADAMTSL4-AS1Q5T5F5 129 aa13.67□□□□□ -0.22
LINC01558-202ENST00000495520 Q9H8V8 135 aa13.67□□□□□ -0.22
LINC01558-202ENST00000495520 ANGP03950 147 aaKnown RBP13.66□□□□□ -0.22
LINC01558-202ENST00000495520 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
LINC01558-202ENST00000495520 PRR34Q9NV39 138 aa13.66□□□□□ -0.22
LINC01558-202ENST00000495520 HERV-K104P63124 156 aa13.66□□□□□ -0.22
LINC01558-202ENST00000495520 COX7B2Q8TF08 81 aa13.66□□□□□ -0.22
LINC01558-202ENST00000495520 TRAV10A0A0B4J240 114 aa13.65□□□□□ -0.22
LINC01558-202ENST00000495520 CD164L2Q6UWJ8 174 aa13.65□□□□□ -0.22
LINC01558-202ENST00000495520 C5orf38Q86SI9 138 aa13.65□□□□□ -0.22
LINC01558-202ENST00000495520 MUSTN1Q8IVN3 82 aa13.65□□□□□ -0.22
LINC01558-202ENST00000495520 FBN3Q75N90 2809 aa13.64□□□□□ -0.23
LINC01558-202ENST00000495520 XCL1P47992 114 aa13.64□□□□□ -0.23
LINC01558-202ENST00000495520 MIAQ16674 131 aa13.64□□□□□ -0.23
LINC01558-202ENST00000495520 ESRGQ1W209 222 aa13.64□□□□□ -0.23
LINC01558-202ENST00000495520 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
LINC01558-202ENST00000495520 UBE2V1Q13404 147 aa13.63□□□□□ -0.23
LINC01558-202ENST00000495520 CHCHD10Q8WYQ3 142 aaPredicted RBP13.63□□□□□ -0.23
LINC01558-202ENST00000495520 IGLL5B9A064 214 aa13.63□□□□□ -0.23
LINC01558-202ENST00000495520 H3BUT2 72 aa13.63□□□□□ -0.23
LINC01558-202ENST00000495520 VAMP3Q15836 100 aa13.63□□□□□ -0.23
LINC01558-202ENST00000495520 RPL24P83731 157 aaKnown RBP13.62□□□□□ -0.23
LINC01558-202ENST00000495520 CFC1BP0CG36 223 aa13.61□□□□□ -0.23
LINC01558-202ENST00000495520 CFC1P0CG37 223 aa13.61□□□□□ -0.23
LINC01558-202ENST00000495520 IFITM1P13164 125 aa13.61□□□□□ -0.23
LINC01558-202ENST00000495520 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
LINC01558-202ENST00000495520 STAB2Q8WWQ8 2551 aa13.61□□□□□ -0.23
LINC01558-202ENST00000495520 A0A1W2PPM0 123 aa13.6□□□□□ -0.23
LINC01558-202ENST00000495520 A4D1N5 150 aa13.6□□□□□ -0.23
LINC01558-202ENST00000495520 ENHOQ6UWT2 76 aa13.59□□□□□ -0.23
LINC01558-202ENST00000495520 WFDC10BQ8IUB3 73 aa13.59□□□□□ -0.23
LINC01558-202ENST00000495520 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
LINC01558-202ENST00000495520 FOXI1Q12951 378 aa13.59□□□□□ -0.23
LINC01558-202ENST00000495520 KLK12Q9UKR0 248 aa13.59□□□□□ -0.23
LINC01558-202ENST00000495520 EIF4EBP3O60516 100 aaPredicted RBP13.58□□□□□ -0.24
LINC01558-202ENST00000495520 SFTA2Q6UW10 78 aa13.58□□□□□ -0.24
LINC01558-202ENST00000495520 Q8IZM0 81 aa13.58□□□□□ -0.24
LINC01558-202ENST00000495520 NAA38Q9BRA0 125 aaKnown RBP13.58□□□□□ -0.24
LINC01558-202ENST00000495520 PPDPFQ9H3Y8 114 aa13.58□□□□□ -0.24
LINC01558-202ENST00000495520 COX7A2LO14548 114 aa13.57□□□□□ -0.24
LINC01558-202ENST00000495520 PRSS2P07478 247 aa13.57□□□□□ -0.24
LINC01558-202ENST00000495520 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
LINC01558-202ENST00000495520 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
LINC01558-202ENST00000495520 TOMM7Q9P0U1 55 aa13.56□□□□□ -0.24
LINC01558-202ENST00000495520 APOMO95445 188 aa13.56□□□□□ -0.24
LINC01558-202ENST00000495520 IGHV3-33P01772 117 aa13.56□□□□□ -0.24
LINC01558-202ENST00000495520 IGLV10-54A0A075B6I4 117 aa13.55□□□□□ -0.24
LINC01558-202ENST00000495520 TRAV8-4A0A0B4J246 113 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms