RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MGPP08493 103 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 CD28P10747 220 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 CMC4P56277 68 aaPredicted RBP3.22□□□□□ -1.89
RTN4-215ENST00000491592 MINOS1Q5TGZ0 78 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 SFTA2Q6UW10 78 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 IGFL3Q6UXB1 125 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 LINC00643Q86TS7 51 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 C14orf178Q8N769 122 aaPredicted RBP3.22□□□□□ -1.89
RTN4-215ENST00000491592 FDCSPQ8NFU4 85 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 AMELXQ99217 191 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 FAM215AQ9Y5M1 114 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 MINOS1-NBL1R4GNA1 71 aa3.22□□□□□ -1.89
RTN4-215ENST00000491592 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 ODF3BA8MYP8 253 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 TIMM17BO60830 172 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 COX7CP15954 63 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 FUSP35637 526 aaKnown RBP eCLIP3.21□□□□□ -1.9
RTN4-215ENST00000491592 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.9
RTN4-215ENST00000491592 ZNF56Q15929 161 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 ASB16-AS1Q495Z4 193 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 Q6ZQT7 251 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 MUSTN1Q8IVN3 82 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 Q8N6K4 173 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 RPL39LQ96EH5 51 aaKnown RBP3.21□□□□□ -1.9
RTN4-215ENST00000491592 CHD7Q9P2D1 2997 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 ICOSQ9Y6W8 199 aa3.21□□□□□ -1.9
RTN4-215ENST00000491592 A0A1B0GVX0 72 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 CLPSL1A2RUU4 121 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 INSP01308 110 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 BLCAPP62952 87 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
RTN4-215ENST00000491592 C15orf32Q32M92 178 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 SOSTDC1Q6X4U4 206 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 Q8N2B8 174 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 LINC00467Q9BRT7 94 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 KIF25-AS1Q9Y6Z4 181 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 S4R3C0 116 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 TRANK1O15050 2925 aa3.2□□□□□ -1.9
RTN4-215ENST00000491592 H7C2G1 150 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 PRB4P10163 310 aaPredicted RBP3.19□□□□□ -1.9
RTN4-215ENST00000491592 RNASE3P12724 160 aaKnown RBP3.19□□□□□ -1.9
RTN4-215ENST00000491592 ZNF22P17026 224 aaPredicted RBP3.19□□□□□ -1.9
RTN4-215ENST00000491592 LINC00315P59091 139 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 MIAQ16674 131 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 SDIM1Q6ZPB5 146 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 C5orf38Q86SI9 138 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 ARHGAP32A7KAX9 2087 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 ZNF318Q5VUA4 2279 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 CHD9Q3L8U1 2897 aa3.19□□□□□ -1.9
RTN4-215ENST00000491592 PRRC2AP48634 2157 aaKnown RBP3.18□□□□□ -1.9
RTN4-215ENST00000491592 A6NED7 52 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 FAM223BA6NKX1 122 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 E7EQL1 145 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 I3L3M4 83 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 ATOX1O00244 68 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 MSMBP08118 114 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 DSCR10P59022 87 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
RTN4-215ENST00000491592 NDPQ00604 133 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 PRR9Q5T870 116 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 VMO1Q7Z5L0 202 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 FAM223AQ8IWN6 122 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 Q8N9W7 124 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 TIMM21Q9BVV7 248 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 UTRNP46939 3433 aa3.18□□□□□ -1.9
RTN4-215ENST00000491592 NDUFA4O00483 81 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 SS18Q15532 418 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 DEFB109BQ30KR1 87 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 SMCR5Q8TEV8 140 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 NDUFA12Q9UI09 145 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 WNK2Q9Y3S1 2297 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 MUC4Q99102 2169 aa3.17□□□□□ -1.9
RTN4-215ENST00000491592 BRCA2P51587 3418 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 C5orf42Q9H799 3197 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 H3BUA1 57 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 M0QY20 66 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 GNRH2O43555 120 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 LY6HO94772 140 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.16□□□□□ -1.9
RTN4-215ENST00000491592 C15orf56Q8N910 161 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 CLEC2BQ92478 149 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 C16orf74Q96GX8 76 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 USMG5Q96IX5 58 aa3.16□□□□□ -1.9
RTN4-215ENST00000491592 TECTAO75443 2155 aa3.15□□□□□ -1.9
RTN4-215ENST00000491592 CUL9Q8IWT3 2517 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 IGHV3OR16-8A0A075B7F1 116 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 A6NDX4 124 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 A8MWP4 228 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 NDUFA1O15239 70 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 BAALC-AS2P0C853 105 aa3.15□□□□□ -1.91
RTN4-215ENST00000491592 C10orf105Q8TEF2 133 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms