RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CLPSL2Q6UWE3 100 aa11.13□□□□□ -0.63
BRD9-208ENST00000489816 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
BRD9-208ENST00000489816 CDC42SE2Q9NRR3 84 aa11.13□□□□□ -0.63
BRD9-208ENST00000489816 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
BRD9-208ENST00000489816 NSD1Q96L73 2696 aaPredicted RBP11.13□□□□□ -0.63
BRD9-208ENST00000489816 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
BRD9-208ENST00000489816 IGLV4-60A0A075B6I1 120 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 HERVK_113P63121 156 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 HIVEP1P15822 2718 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 PF4P02776 101 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
BRD9-208ENST00000489816 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
BRD9-208ENST00000489816 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
BRD9-208ENST00000489816 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
BRD9-208ENST00000489816 DAZ4Q86SG3 579 aaKnown RBP11.11□□□□□ -0.63
BRD9-208ENST00000489816 DAZ3Q9NR90 486 aaKnown RBP11.11□□□□□ -0.63
BRD9-208ENST00000489816 TIRAPP58753 221 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
BRD9-208ENST00000489816 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 SPANXDQ9BXN6 97 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 SPANXCQ9NY87 97 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 NDUFA1O15239 70 aa11.1□□□□□ -0.63
BRD9-208ENST00000489816 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 CIDEAO60543 219 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 CSNK1G2-AS1Q8NCQ2 148 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 C16orf74Q96GX8 76 aa11.09□□□□□ -0.63
BRD9-208ENST00000489816 TRBV30A0A0K0K1B3 111 aa11.08□□□□□ -0.64
BRD9-208ENST00000489816 ATP6V0E2Q8NHE4 81 aa11.08□□□□□ -0.64
BRD9-208ENST00000489816 IGLV5-45A0A087WSX0 123 aa11.07□□□□□ -0.64
BRD9-208ENST00000489816 COX6CP09669 75 aa11.07□□□□□ -0.64
BRD9-208ENST00000489816 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 H7C423 109 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 J3QKU1 62 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 PFN2P35080 140 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 FHL2Q14192 279 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 TEX29Q8N6K0 151 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 F5H768 121 aa11.06□□□□□ -0.64
BRD9-208ENST00000489816 HILS1P60008 231 aa11.05□□□□□ -0.64
BRD9-208ENST00000489816 PKD1L1Q8TDX9 2849 aa11.04□□□□□ -0.64
BRD9-208ENST00000489816 GYPEP15421 78 aa11.04□□□□□ -0.64
BRD9-208ENST00000489816 XCL1P47992 114 aa11.04□□□□□ -0.64
BRD9-208ENST00000489816 Q8N3U1 123 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 TRBV10-2A0A0K0K1G8 114 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 LINC00158P58513 81 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
BRD9-208ENST00000489816 TRBV6-4A0A1B0GX49 114 aa11.02□□□□□ -0.65
BRD9-208ENST00000489816 DEFB135Q30KP9 77 aa11.02□□□□□ -0.65
BRD9-208ENST00000489816 KMT2BQ9UMN6 2715 aaPredicted RBP11.02□□□□□ -0.65
BRD9-208ENST00000489816 INAFM1C9JVW0 142 aa11.02□□□□□ -0.65
BRD9-208ENST00000489816 LY6G6DO95868 133 aa11.02□□□□□ -0.65
BRD9-208ENST00000489816 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
BRD9-208ENST00000489816 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
BRD9-208ENST00000489816 CKS1BP61024 79 aa11□□□□□ -0.65
BRD9-208ENST00000489816 IFITM1P13164 125 aa11□□□□□ -0.65
BRD9-208ENST00000489816 UBE2WQ96B02 151 aa11□□□□□ -0.65
BRD9-208ENST00000489816 HTN3P15516 51 aa11□□□□□ -0.65
BRD9-208ENST00000489816 A0A1B0GV72 72 aa10.99□□□□□ -0.65
BRD9-208ENST00000489816 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
BRD9-208ENST00000489816 STAB1Q9NY15 2570 aa10.99□□□□□ -0.65
BRD9-208ENST00000489816 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
BRD9-208ENST00000489816 Q9HAA7 133 aa10.99□□□□□ -0.65
BRD9-208ENST00000489816 F8P00451 2351 aa10.98□□□□□ -0.65
BRD9-208ENST00000489816 LST1O00453 97 aa10.98□□□□□ -0.65
BRD9-208ENST00000489816 TIMM17BO60830 172 aa10.98□□□□□ -0.65
BRD9-208ENST00000489816 FAM222AQ5U5X8 452 aa10.98□□□□□ -0.65
BRD9-208ENST00000489816 CMC4P56277 68 aaPredicted RBP10.97□□□□□ -0.65
BRD9-208ENST00000489816 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
BRD9-208ENST00000489816 FAM218AQ96MZ4 157 aa10.97□□□□□ -0.65
BRD9-208ENST00000489816 TRAV8-4A0A0B4J246 113 aa10.96□□□□□ -0.65
BRD9-208ENST00000489816 NOTCH1P46531 2555 aa10.96□□□□□ -0.66
BRD9-208ENST00000489816 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.66
BRD9-208ENST00000489816 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.66
BRD9-208ENST00000489816 C6orf226Q5I0X4 101 aa10.95□□□□□ -0.66
BRD9-208ENST00000489816 LINC00337Q8N6G1 96 aa10.95□□□□□ -0.66
BRD9-208ENST00000489816 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
BRD9-208ENST00000489816 X6R8D5 127 aa10.95□□□□□ -0.66
BRD9-208ENST00000489816 LINC00959A0A1B0GUT2 108 aa10.93□□□□□ -0.66
BRD9-208ENST00000489816 ATP5G1P05496 136 aa10.93□□□□□ -0.66
BRD9-208ENST00000489816 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
BRD9-208ENST00000489816 PAX4O43316 350 aa10.93□□□□□ -0.66
BRD9-208ENST00000489816 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 MAST4O15021 2626 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 SNCGO76070 127 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 SCGB1A1P11684 91 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
BRD9-208ENST00000489816 FBN1P35555 2871 aaKnown RBP10.92□□□□□ -0.66
BRD9-208ENST00000489816 IGKV2-28A0A075B6P5 120 aa10.91□□□□□ -0.66
BRD9-208ENST00000489816 COX7A2LO14548 114 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms