RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IGKV2-40A0A087WW87 121 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 TRBV7-4A0A0J9YYF1 115 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 E7EQL1 145 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 M0R1W7 72 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 PSPHP1O15172 72 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 IGKV2D-40P01614 121 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 MIFP14174 115 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 SNRPD3P62318 126 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 RBM3P98179 157 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 MOBPQ13875 183 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 C10orf55Q5SWW7 151 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 PHF5AQ7RTV0 110 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 FAM19A3Q7Z5A8 133 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 LY6G5BQ8NDX9 201 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 LINC01560Q8TB33 94 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 LINC00308Q8TCZ7 52 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 NDUFA12Q9UI09 145 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 UNC13CQ8NB66 2214 aa2.22□□□□□ -2.05
ECHDC1-217ENST00000488087 TRAV21A0A0B4J279 112 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 F8WEM9 126 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 H3BQ85 93 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 CTSGP08311 255 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 CD28P10747 220 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 HCP5Q6MZN7 132 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 Q8TAT8 98 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 RPL39LQ96EH5 51 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 GAFA1Q96PS6 74 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 UBL5Q9BZL1 73 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 LINC00474Q9P2X8 69 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 ZNF407Q9C0G0 2248 aa2.21□□□□□ -2.06
ECHDC1-217ENST00000488087 CABIN1Q9Y6J0 2220 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 TRAV23DV6A0A075B6W5 121 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LOC110117498A0A087WWA1 95 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 IGHV1-3A0A0C4DH29 117 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 PDE6GP18545 87 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 SS18Q15532 418 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LY6EQ16553 131 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 FBXL19-AS1Q494R0 122 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 CLEC19AQ6UXS0 136 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LEAP2Q969E1 77 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 LINC00588Q9Y4M8 146 aa2.2□□□□□ -2.06
ECHDC1-217ENST00000488087 RP1P56715 2156 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 IGLV3-9A0A075B6K5 115 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 hDV103S1A0JD37 113 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 BUB1B-PAK6H3BSN5 160 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 IGHV3-11P01762 117 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 DAD1P61803 113 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 RPL39P62891 51 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 UBE2BP63146 152 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 ITLN2Q8WWU7 325 aaPredicted RBP2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 RMI2Q96E14 147 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 CYP4F30PQ9H0H9 118 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 SND1-IT1Q9HBX3 110 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 C14orf132Q9NPU4 83 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 PHLDA3Q9Y5J5 127 aa2.19□□□□□ -2.06
ECHDC1-217ENST00000488087 GOLGB1Q14789 3259 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 LCE6AA0A183 80 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 TMEM256-PLSCR3K7ERE1 68 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 M0QY20 66 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 M0R378 163 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 TFF1P04155 84 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 RNASE3P12724 160 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 S100A4P26447 101 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 FUSP35637 526 aaKnown RBP eCLIP2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 DEFB103AP81534 67 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 ZFAND2AQ8N6M9 145 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 BPESC1Q9GZL8 116 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 C11orf68Q9H3H3 251 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 KAAG1Q9UBP8 84 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 ESPL1Q14674 2120 aa2.18□□□□□ -2.06
ECHDC1-217ENST00000488087 DSCAMO60469 2012 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 KNTC1P50748 2209 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 RTTNQ86VV8 2226 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 TRAV12-3A0A0B4J271 114 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 UBE2L6O14933 153 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 LY6HO94772 140 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 CRPP02741 224 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 MGPP08493 103 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 CCL4P13236 92 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 KRTAP10-1P60331 282 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 DEFB114Q30KQ6 69 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 SOSTDC1Q6X4U4 206 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 C8orf17Q9NRJ1 99 aa2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 PRRC2BQ5JSZ5 2229 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-217ENST00000488087 MED12Q93074 2177 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 DSCAML1Q8TD84 2053 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 IGHV3-21A0A0B4J1V1 117 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 IGHV3-72A0A0B4J1Y9 119 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms