RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 NIPBLQ6KC79 2804 aaeCLIP3.99□□□□□ -1.77
KPNA1-208ENST00000485027 CRIP2P52943 208 aaPredicted RBP3.98□□□□□ -1.77
KPNA1-208ENST00000485027 Q6ZR03 302 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 C6orf201Q7Z4U5 140 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 HIGD1BQ9P298 99 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 CR1P17927 2039 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 NAV3Q8IVL0 2385 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 RTTNQ86VV8 2226 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 IGKV3D-15A0A087WSY6 115 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 DEFB108AA8MXU0 73 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 XCL1P47992 114 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 NPC2P61916 151 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 RPL36AP83881 106 aaKnown RBP3.98□□□□□ -1.77
KPNA1-208ENST00000485027 Q8IYB0 196 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 MUC7Q8TAX7 377 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 LINC00479Q96M42 142 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 C20orf78Q9BR46 151 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 HILPDAQ9Y5L2 63 aa3.98□□□□□ -1.77
KPNA1-208ENST00000485027 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 TCL1BO95988 128 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 LHBP01229 141 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 MGST1P10620 155 aaKnown RBP3.97□□□□□ -1.77
KPNA1-208ENST00000485027 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
KPNA1-208ENST00000485027 ASIPP42127 132 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 SH2D6Q7Z4S9 175 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
KPNA1-208ENST00000485027 IAPPP10997 89 aa3.96□□□□□ -1.78
KPNA1-208ENST00000485027 SPANXN5Q5MJ07 72 aa3.96□□□□□ -1.78
KPNA1-208ENST00000485027 LYZL1Q6UWQ5 148 aa3.96□□□□□ -1.78
KPNA1-208ENST00000485027 SONP18583 2426 aaKnown RBP3.96□□□□□ -1.78
KPNA1-208ENST00000485027 DNHD1Q96M86 4753 aa3.96□□□□□ -1.78
KPNA1-208ENST00000485027 ZFHX3Q15911 3703 aa3.96□□□□□ -1.78
KPNA1-208ENST00000485027 IGLV1-51P01701 117 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 CKS2P33552 79 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 ZNF818PQ6ZRF7 136 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 DPH3P1Q9H4G8 78 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 CSPG4Q6UVK1 2322 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 NACAE9PAV3 2078 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 AGRNO00468 2067 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 GNRH2O43555 120 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 SPINK4O60575 86 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 IGLV3-1P01715 115 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 MPV17P39210 176 aa3.95□□□□□ -1.78
KPNA1-208ENST00000485027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.95□□□□□ -1.788e-8■■■■■ 40.2
KPNA1-208ENST00000485027 MRPL33O75394 65 aaKnown RBP3.94□□□□□ -1.78
KPNA1-208ENST00000485027 SNCGO76070 127 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 ARL14EPLP0DKL9 152 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 GCHFRP30047 84 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 CYYR1Q96J86 154 aa3.94□□□□□ -1.78
KPNA1-208ENST00000485027 FN1P02751 2386 aaKnown RBP3.94□□□□□ -1.78
KPNA1-208ENST00000485027 ABCA1O95477 2261 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 IGKV2D-26A0A0A0MRZ7 120 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 TRAV3A0A0B4J244 114 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 MSMBP08118 114 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 SAA1P0DJI8 122 aaPredicted RBP3.93□□□□□ -1.78
KPNA1-208ENST00000485027 COX7CP15954 63 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 Q8N814 137 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 SLC50A1Q9BRV3 221 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 TMEM167BQ9NRX6 74 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 TCRBV4S1A1TA0A5B7 111 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 FXYD2P54710 66 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 GDF5OSQ5U4N7 250 aa3.93□□□□□ -1.78
KPNA1-208ENST00000485027 MALRD1Q5VYJ5 2156 aa3.92□□□□□ -1.78
KPNA1-208ENST00000485027 JMJD1CQ15652 2540 aa3.92□□□□□ -1.78
KPNA1-208ENST00000485027 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
KPNA1-208ENST00000485027 FXYD3Q14802 87 aa3.92□□□□□ -1.78
KPNA1-208ENST00000485027 RNF5Q99942 180 aa3.92□□□□□ -1.78
KPNA1-208ENST00000485027 NHP2Q9NX24 153 aaKnown RBP3.92□□□□□ -1.78
KPNA1-208ENST00000485027 SVEP1Q4LDE5 3571 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 A0A096LNJ9 63 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 H3BQ85 93 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 DEFB113Q30KQ7 82 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 FAM27BQ5VT28 67 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 SBSPONQ8IVN8 264 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 ATRQ13535 2644 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 TRBV6-6A0A0A6YYG2 114 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 LOC107984156A0A0G2JMH3 177 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 E7EQL1 145 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 IGKV3-15P01624 115 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 CD24P25063 80 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 ROMO1P60602 79 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 KRTAP24-1Q3LI83 254 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 ARL17AQ8IVW1 177 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 Q8N8P6 123 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 CCL19Q99731 98 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 GFRA4Q9GZZ7 299 aa3.91□□□□□ -1.78
KPNA1-208ENST00000485027 HIVEP2P31629 2446 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms