RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZANQ9Y493 2812 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 AGRNO00468 2067 aa5.49□□□□□ -1.53
SNX13-208ENST00000482558 K7ERU9 68 aa5.48□□□□□ -1.53
SNX13-208ENST00000482558 C12orf74Q32Q52 190 aa5.48□□□□□ -1.53
SNX13-208ENST00000482558 MRPL55Q7Z7F7 128 aaKnown RBP5.48□□□□□ -1.53
SNX13-208ENST00000482558 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
SNX13-208ENST00000482558 SLC25A29Q8N8R3 303 aa5.48□□□□□ -1.53
SNX13-208ENST00000482558 NHP2Q9NX24 153 aaKnown RBP5.48□□□□□ -1.53
SNX13-208ENST00000482558 SPCS1Q9Y6A9 102 aa5.48□□□□□ -1.53
SNX13-208ENST00000482558 SORL1Q92673 2214 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 TRGV1A0A0A0MS02 117 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 A0A0J9YY99 117 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 ZNRF2Q8NHG8 242 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 COPS9Q8WXC6 57 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 TTTY13Q9BZ97 58 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 GTSF1LQ9H1H1 148 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
SNX13-208ENST00000482558 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 CELSR1Q9NYQ6 3014 aa5.47□□□□□ -1.53
SNX13-208ENST00000482558 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.46□□□□□ -1.54
SNX13-208ENST00000482558 IGHV3-73A0A0B4J1V6 119 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 IGHV3-38A0A0C4DH36 116 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 TEX48A0A1B0GUV7 120 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 A0A1B0GV72 72 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 SMIM9A6NGZ8 99 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 IGLL5B9A064 214 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 F8W1H4 67 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
SNX13-208ENST00000482558 PFN2P35080 140 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 RRN3P1Q2M238 152 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 FAM19A3Q7Z5A8 133 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 FLNAP21333 2647 aaKnown RBP5.46□□□□□ -1.54
SNX13-208ENST00000482558 CCDC168Q8NDH2 2452 aa5.46□□□□□ -1.54
SNX13-208ENST00000482558 TLN2Q9Y4G6 2542 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 ZFHX3Q15911 3703 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 TIMM17BO60830 172 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 UBE2D1P51668 147 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 HERVK_113P63121 156 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 C9orf66Q5T8R8 295 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
SNX13-208ENST00000482558 TRBV20-1A0A075B6N2 111 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 A0A0J9YXV3 536 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 J3QR89 54 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 IGHV3-30P01768 117 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 IGHV3-30-5P0DP03 117 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 UBE2D3P61077 147 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 UBE2D2P62837 147 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 OCIAD2Q56VL3 154 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 CSNK1G2-AS1Q8NCQ2 148 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
SNX13-208ENST00000482558 HIVEP2P31629 2446 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 UBE2L6O14933 153 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 LY6G6DO95868 133 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 IFITM1P13164 125 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 EMP1P54849 157 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 APOC4P55056 127 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 CIRBPQ14011 172 aaKnown RBP5.43□□□□□ -1.54
SNX13-208ENST00000482558 VSIG2Q96IQ7 327 aa5.43□□□□□ -1.54
SNX13-208ENST00000482558 NOP10Q9NPE3 64 aaKnown RBP5.43□□□□□ -1.54
SNX13-208ENST00000482558 SONP18583 2426 aaKnown RBP5.43□□□□□ -1.54
SNX13-208ENST00000482558 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 GIG44P09565 113 aaPredicted RBP5.42□□□□□ -1.54
SNX13-208ENST00000482558 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 Q6ZTI0 123 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
SNX13-208ENST00000482558 OPRPNQ99935 248 aaPredicted RBP5.42□□□□□ -1.54
SNX13-208ENST00000482558 TMEM243Q9BU79 118 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 SPANXDQ9BXN6 97 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 SPANXCQ9NY87 97 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 PDZD2O15018 2839 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 HECTD1Q9ULT8 2610 aa5.42□□□□□ -1.54
SNX13-208ENST00000482558 NACAE9PAV3 2078 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.41□□□□□ -1.54
SNX13-208ENST00000482558 TRGV4A0A0C4DH28 118 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 IGKV2-29A2NJV5 120 aaPredicted RBP5.41□□□□□ -1.54
SNX13-208ENST00000482558 K7ERJ3 54 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 SFTA2Q6UW10 78 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 SBSPONQ8IVN8 264 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 C10orf126Q8N4M7 172 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
SNX13-208ENST00000482558 PLAC8L1A1L4L8 177 aa5.4□□□□□ -1.54
SNX13-208ENST00000482558 NDUFA1O15239 70 aa5.4□□□□□ -1.54
SNX13-208ENST00000482558 PRM2P04554 102 aa5.4□□□□□ -1.54
SNX13-208ENST00000482558 Q6ZUT4 128 aa5.4□□□□□ -1.54
SNX13-208ENST00000482558 LINC00612Q8N6U2 182 aa5.4□□□□□ -1.54
SNX13-208ENST00000482558 AKAP9Q99996 3911 aa5.4□□□□□ -1.55
SNX13-208ENST00000482558 CSMD2Q7Z408 3487 aa5.39□□□□□ -1.55
SNX13-208ENST00000482558 CRLF1O75462 422 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms