RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 IQCJQ1A5X6 159 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 ATOH7Q8N100 152 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 C10orf82Q8WW14 230 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 C12orf57Q99622 126 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 WFDC6Q9BQY6 131 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 RERGLQ9H628 205 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 SPTAN1Q13813 2472 aaKnown RBP0.67□□□□□ -2.3
SSB-210ENST00000474273 CSPG4Q6UVK1 2322 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 CREBBPQ92793 2442 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
SSB-210ENST00000474273 ACACBO00763 2458 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 BRCA2P51587 3418 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 FAM208BQ5VWN6 2430 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 PIEZO1Q92508 2521 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 RANBP2P49792 3224 aaKnown RBP0.66□□□□□ -2.3
SSB-210ENST00000474273 TRBV6-7A0A0A0MS04 114 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 IGKV3OR2-268A0A0C4DH90 116 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 A0A1B0GWA3 101 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 TMEM30CPA0ZSE6 113 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 OOSP1A8MZH6 123 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 LYNX1G3V0Z9 82 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 GNGT2O14610 69 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 YPEL1O60688 119 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 MRPL33O75394 65 aaKnown RBP0.66□□□□□ -2.3
SSB-210ENST00000474273 S100A1P23297 94 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 S100PP25815 95 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 RPL37AP61513 92 aaKnown RBP0.66□□□□□ -2.3
SSB-210ENST00000474273 INSL4Q14641 139 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 NCMAPQ5T1S8 102 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 Q6AWC8 147 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 DEFB107AQ8IZN7 70 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 Q8N8P6 123 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 IFI27L1Q96BM0 104 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 SMR3AQ99954 134 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 TMEM242Q9NWH2 141 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 COA4Q9NYJ1 87 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 MRPL36Q9P0J6 103 aaKnown RBP0.66□□□□□ -2.3
SSB-210ENST00000474273 GNG8Q9UK08 70 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 IER3IP1Q9Y5U9 82 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 PTPN13Q12923 2485 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 PLCE1Q9P212 2302 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 SPG11Q96JI7 2443 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 ABCA2Q9BZC7 2435 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 SZT2Q5T011 3432 aa0.66□□□□□ -2.3
SSB-210ENST00000474273 WNK1Q9H4A3 2382 aa0.65□□□□□ -2.3
SSB-210ENST00000474273 TRANK1O15050 2925 aa0.65□□□□□ -2.3
SSB-210ENST00000474273 TNCP24821 2201 aa0.65□□□□□ -2.3
SSB-210ENST00000474273 FASNP49327 2511 aaKnown RBP0.65□□□□□ -2.31
SSB-210ENST00000474273 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 TRIOO75962 3097 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 TRAV23DV6A0A075B6W5 121 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 IGLV3-32A0A0A0MS00 114 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 CLPSL1A2RUU4 121 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 A6NIN4 97 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 DEFB108AA8MXU0 73 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 MCRIP1C9JLW8 97 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 H3BSH0 61 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 GEMIN2O14893 280 aaKnown RBP0.65□□□□□ -2.31
SSB-210ENST00000474273 IL5P05113 134 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 GYPBP06028 91 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 AKAIN1P0CW23 69 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 RPS27P42677 84 aaKnown RBP0.65□□□□□ -2.31
SSB-210ENST00000474273 SMIM11AP58511 58 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 FXYD4P59646 89 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 UBE2G1P62253 170 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 TFF3Q07654 80 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 CATR1Q13166 79 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 S100A7L2Q5SY68 101 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 OR2T2Q6IF00 324 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 LINC00299Q6ZSB3 139 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 DEFB108BQ8NET1 73 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 PSMG3Q9BT73 122 aaPredicted RBP0.65□□□□□ -2.31
SSB-210ENST00000474273 TMEM14CQ9P0S9 112 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 FBN2P35556 2912 aa0.65□□□□□ -2.31
SSB-210ENST00000474273 LAMA2P24043 3122 aaKnown RBP0.64□□□□□ -2.31
SSB-210ENST00000474273 TRBV10-1A0A0K0K1A3 114 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 TCRBV3S1A0A5B6 114 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 FXYD1O00168 92 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 GYPAP02724 150 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 IFI6P09912 130 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 FXYD6P3P58550 94 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 CCL8P80075 99 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 FXYD3Q14802 87 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 C9orf116Q5BN46 136 aaPredicted RBP0.64□□□□□ -2.31
SSB-210ENST00000474273 SPANXN1Q5VSR9 72 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 PPDPFLQ8WWR9 84 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 DMAC1Q96GE9 116 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 TMEM141Q96I45 108 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 AMELYQ99218 206 aa0.64□□□□□ -2.31
SSB-210ENST00000474273 CCL19Q99731 98 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms