RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
UBXN11-213ENST00000472155 STAB1Q9NY15 2570 aa10.56□□□□□ -0.72
UBXN11-213ENST00000472155 A0A096LPF7 62 aa10.56□□□□□ -0.72
UBXN11-213ENST00000472155 TRBV6-4A0A1B0GX49 114 aa10.56□□□□□ -0.72
UBXN11-213ENST00000472155 TMEM243Q9BU79 118 aa10.56□□□□□ -0.72
UBXN11-213ENST00000472155 Q9H8V8 135 aa10.55□□□□□ -0.72
UBXN11-213ENST00000472155 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 F5H768 121 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 UBE2L6O14933 153 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 SMAGPQ0VAQ4 97 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 SCGB1C2P0DMR2 95 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 CSDC2Q9Y534 153 aaKnown RBP10.54□□□□□ -0.72
UBXN11-213ENST00000472155 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
UBXN11-213ENST00000472155 HERVK_113P63121 156 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 MIAQ16674 131 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
UBXN11-213ENST00000472155 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
UBXN11-213ENST00000472155 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
UBXN11-213ENST00000472155 NDUFA1O15239 70 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 SPANXCQ9NY87 97 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 Q1RN00 199 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 CHCHD5Q9BSY4 110 aa10.52□□□□□ -0.73
UBXN11-213ENST00000472155 GYPEP15421 78 aa10.51□□□□□ -0.73
UBXN11-213ENST00000472155 FAM222AQ5U5X8 452 aa10.51□□□□□ -0.73
UBXN11-213ENST00000472155 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
UBXN11-213ENST00000472155 CMYA5Q8N3K9 4069 aa10.5□□□□□ -0.73
UBXN11-213ENST00000472155 TRIAP1O43715 76 aa10.5□□□□□ -0.73
UBXN11-213ENST00000472155 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
UBXN11-213ENST00000472155 Q8N3U1 123 aa10.49□□□□□ -0.73
UBXN11-213ENST00000472155 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
UBXN11-213ENST00000472155 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
UBXN11-213ENST00000472155 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
UBXN11-213ENST00000472155 SIGMAR1Q99720 223 aa10.48□□□□□ -0.73
UBXN11-213ENST00000472155 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
UBXN11-213ENST00000472155 PRIMA1Q86XR5 153 aa10.48□□□□□ -0.73
UBXN11-213ENST00000472155 KIR2DL5BQ8NHK3 375 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 MAST4O15021 2626 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 LINC00308Q8TCZ7 52 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 CITED1Q99966 193 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 CELA1Q9UNI1 258 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
UBXN11-213ENST00000472155 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.73
UBXN11-213ENST00000472155 C9JAW5 83 aa10.46□□□□□ -0.74
UBXN11-213ENST00000472155 C5orf38Q86SI9 138 aa10.46□□□□□ -0.74
UBXN11-213ENST00000472155 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
UBXN11-213ENST00000472155 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
UBXN11-213ENST00000472155 IGHV4-28A0A0C4DH34 117 aa10.45□□□□□ -0.74
UBXN11-213ENST00000472155 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
UBXN11-213ENST00000472155 TRBV20-1A0A075B6N2 111 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
UBXN11-213ENST00000472155 FOXI1Q12951 378 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 NOTCH1P46531 2555 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 TIMM17BO60830 172 aa10.44□□□□□ -0.74
UBXN11-213ENST00000472155 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
UBXN11-213ENST00000472155 IGHV3OR16-9A0A0B4J2B5 98 aa10.43□□□□□ -0.74
UBXN11-213ENST00000472155 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
UBXN11-213ENST00000472155 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
UBXN11-213ENST00000472155 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
UBXN11-213ENST00000472155 SLC25A20O43772 301 aa10.42□□□□□ -0.74
UBXN11-213ENST00000472155 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
UBXN11-213ENST00000472155 H7C423 109 aa10.41□□□□□ -0.74
UBXN11-213ENST00000472155 PAX4O43316 350 aa10.41□□□□□ -0.74
UBXN11-213ENST00000472155 XCL1P47992 114 aa10.41□□□□□ -0.74
UBXN11-213ENST00000472155 CIRBPQ14011 172 aaKnown RBP10.41□□□□□ -0.74
UBXN11-213ENST00000472155 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
UBXN11-213ENST00000472155 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.74
UBXN11-213ENST00000472155 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
UBXN11-213ENST00000472155 IFITM1P13164 125 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 Q8NAQ8 132 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 SMIM9A6NGZ8 99 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 SCGB1A1P11684 91 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 HTN3P15516 51 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
UBXN11-213ENST00000472155 A0A1B0GV72 72 aa10.38□□□□□ -0.75
UBXN11-213ENST00000472155 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
UBXN11-213ENST00000472155 MIR7-3HGQ8N6C7 128 aa10.38□□□□□ -0.75
UBXN11-213ENST00000472155 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
UBXN11-213ENST00000472155 J3QR89 54 aa10.37□□□□□ -0.75
UBXN11-213ENST00000472155 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
UBXN11-213ENST00000472155 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
UBXN11-213ENST00000472155 CKS1BP61024 79 aa10.37□□□□□ -0.75
UBXN11-213ENST00000472155 DAD1P61803 113 aa10.37□□□□□ -0.75
UBXN11-213ENST00000472155 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 A0A087WZ39 114 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 PFN2P35080 140 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 APOC4P55056 127 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
UBXN11-213ENST00000472155 RNF183Q96D59 192 aa10.36□□□□□ -0.75
UBXN11-213ENST00000472155 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms