RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 LINC00315P59091 139 aa8.4□□□□□ -1.06
RBM39-223ENST00000463004 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.07
RBM39-223ENST00000463004 PRM2P04554 102 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 PDE6GP18545 87 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 A0A096LNJ9 63 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 TRBV10-2A0A0K0K1G8 114 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 BPTFQ12830 3046 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 POLQO75417 2590 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
RBM39-223ENST00000463004 A0A087WZ39 114 aa8.38□□□□□ -1.07
RBM39-223ENST00000463004 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
RBM39-223ENST00000463004 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
RBM39-223ENST00000463004 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
RBM39-223ENST00000463004 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
RBM39-223ENST00000463004 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
RBM39-223ENST00000463004 C2CD3Q4AC94 2353 aa8.37□□□□□ -1.07
RBM39-223ENST00000463004 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
RBM39-223ENST00000463004 MTORP42345 2549 aa8.37□□□□□ -1.07
RBM39-223ENST00000463004 DAND5Q8N907 189 aa8.37□□□□□ -1.07
RBM39-223ENST00000463004 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
RBM39-223ENST00000463004 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
RBM39-223ENST00000463004 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
RBM39-223ENST00000463004 TMEM256-PLSCR3K7ERE1 68 aa8.36□□□□□ -1.07
RBM39-223ENST00000463004 COX7BP24311 80 aa8.35□□□□□ -1.07
RBM39-223ENST00000463004 TRACP01848 142 aa8.35□□□□□ -1.07
RBM39-223ENST00000463004 AGRNO00468 2067 aa8.35□□□□□ -1.07
RBM39-223ENST00000463004 KRTAP1-1Q07627 177 aa8.34□□□□□ -1.07
RBM39-223ENST00000463004 C5orf42Q9H799 3197 aa8.34□□□□□ -1.07
RBM39-223ENST00000463004 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
RBM39-223ENST00000463004 A0A1B0GX51 115 aa8.34□□□□□ -1.08
RBM39-223ENST00000463004 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.08
RBM39-223ENST00000463004 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
RBM39-223ENST00000463004 Q6ZSN1 163 aa8.33□□□□□ -1.08
RBM39-223ENST00000463004 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-223ENST00000463004 Q6ZTC4 211 aa8.33□□□□□ -1.08
RBM39-223ENST00000463004 NCR3O14931 201 aa8.32□□□□□ -1.08
RBM39-223ENST00000463004 PCP4P48539 62 aa8.32□□□□□ -1.08
RBM39-223ENST00000463004 X6R8D5 127 aa8.32□□□□□ -1.08
RBM39-223ENST00000463004 LECT2O14960 151 aa8.31□□□□□ -1.08
RBM39-223ENST00000463004 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
RBM39-223ENST00000463004 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
RBM39-223ENST00000463004 ACANP16112 2415 aa8.31□□□□□ -1.08
RBM39-223ENST00000463004 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
RBM39-223ENST00000463004 LOC107984640A0A0U1RRK4 108 aa8.3□□□□□ -1.08
RBM39-223ENST00000463004 M0R378 163 aa8.3□□□□□ -1.08
RBM39-223ENST00000463004 RETNQ9HD89 108 aa8.3□□□□□ -1.08
RBM39-223ENST00000463004 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
RBM39-223ENST00000463004 UBE2AP49459 152 aa8.29□□□□□ -1.08
RBM39-223ENST00000463004 ANAPC13Q9BS18 74 aa8.29□□□□□ -1.08
RBM39-223ENST00000463004 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
RBM39-223ENST00000463004 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
RBM39-223ENST00000463004 HIST1H4AP62805 103 aaKnown RBP8.29□□□□□ -1.08
RBM39-223ENST00000463004 A8MZ25 164 aa8.28□□□□□ -1.08
RBM39-223ENST00000463004 B9D2Q9BPU9 175 aa8.28□□□□□ -1.08
RBM39-223ENST00000463004 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
RBM39-223ENST00000463004 PRRC2CQ9Y520 2896 aaKnown RBP8.28□□□□□ -1.08
RBM39-223ENST00000463004 G3V4G9 280 aa8.27□□□□□ -1.08
RBM39-223ENST00000463004 PCNTO95613 3336 aa8.27□□□□□ -1.09
RBM39-223ENST00000463004 TCL1BO95988 128 aa8.27□□□□□ -1.09
RBM39-223ENST00000463004 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.09
RBM39-223ENST00000463004 NDUFC2O95298 119 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 RBM3P98179 157 aaKnown RBP8.26□□□□□ -1.09
RBM39-223ENST00000463004 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 F8P00451 2351 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 CYSRT1A8MQ03 144 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 Q8NAQ8 132 aa8.26□□□□□ -1.09
RBM39-223ENST00000463004 FOXI1Q12951 378 aa8.25□□□□□ -1.09
RBM39-223ENST00000463004 WFDC2Q14508 124 aa8.25□□□□□ -1.09
RBM39-223ENST00000463004 CLEC2BQ92478 149 aa8.25□□□□□ -1.09
RBM39-223ENST00000463004 CSNK1G2-AS1Q8NCQ2 148 aa8.25□□□□□ -1.09
RBM39-223ENST00000463004 DHRS4-AS1Q9P1J3 65 aa8.24□□□□□ -1.09
RBM39-223ENST00000463004 TRIAP1O43715 76 aa8.24□□□□□ -1.09
RBM39-223ENST00000463004 PRB2P02812 416 aaPredicted RBP8.24□□□□□ -1.09
RBM39-223ENST00000463004 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
RBM39-223ENST00000463004 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
RBM39-223ENST00000463004 HAMPP81172 84 aa8.23□□□□□ -1.09
RBM39-223ENST00000463004 COX6A2Q02221 97 aa8.23□□□□□ -1.09
RBM39-223ENST00000463004 NTM-AS1Q6ZSK4 140 aa8.23□□□□□ -1.09
RBM39-223ENST00000463004 MKI67P46013 3256 aaKnown RBP8.23□□□□□ -1.09
RBM39-223ENST00000463004 LST1O00453 97 aa8.22□□□□□ -1.09
RBM39-223ENST00000463004 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
RBM39-223ENST00000463004 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
RBM39-223ENST00000463004 DEFB105AQ8NG35 78 aa8.21□□□□□ -1.09
RBM39-223ENST00000463004 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
RBM39-223ENST00000463004 LINC00612Q8N6U2 182 aa8.21□□□□□ -1.1
RBM39-223ENST00000463004 XAGE1AQ9HD64 81 aa8.21□□□□□ -1.1
RBM39-223ENST00000463004 RPL28P46779 137 aaKnown RBP8.21□□□□□ -1.1
RBM39-223ENST00000463004 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
RBM39-223ENST00000463004 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
RBM39-223ENST00000463004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.2□□□□□ -1.1
RBM39-223ENST00000463004 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
RBM39-223ENST00000463004 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
RBM39-223ENST00000463004 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
RBM39-223ENST00000463004 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
RBM39-223ENST00000463004 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
RBM39-223ENST00000463004 SBSPONQ8IVN8 264 aa8.18□□□□□ -1.1
RBM39-223ENST00000463004 MUC4Q99102 2169 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms