RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 NANOS2P60321 138 aaKnown RBP12.69□□□□□ -0.38
ATPAF2-202ENST00000462733 LINC00612Q8N6U2 182 aa12.69□□□□□ -0.38
ATPAF2-202ENST00000462733 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
ATPAF2-202ENST00000462733 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
ATPAF2-202ENST00000462733 LOC107984156A0A0G2JMH3 177 aa12.67□□□□□ -0.38
ATPAF2-202ENST00000462733 A0A0J9YXY3 114 aa12.67□□□□□ -0.38
ATPAF2-202ENST00000462733 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
ATPAF2-202ENST00000462733 ARL17AQ8IVW1 177 aa12.67□□□□□ -0.38
ATPAF2-202ENST00000462733 A4D1N5 150 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 ETDBQ3ZM63 59 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 Q6ZTC4 211 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 HTN3P15516 51 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 TIRAPP58753 221 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
ATPAF2-202ENST00000462733 TIMM17BO60830 172 aa12.64□□□□□ -0.39
ATPAF2-202ENST00000462733 PSMB2P49721 201 aa12.64□□□□□ -0.39
ATPAF2-202ENST00000462733 CEMP1Q6PRD7 247 aaPredicted RBP12.64□□□□□ -0.39
ATPAF2-202ENST00000462733 Q6ZUT4 128 aa12.64□□□□□ -0.39
ATPAF2-202ENST00000462733 IGHV3-64A0A075B6Q5 118 aa12.63□□□□□ -0.39
ATPAF2-202ENST00000462733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-202ENST00000462733 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-202ENST00000462733 GEMIN7Q9H840 131 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-202ENST00000462733 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 ATP5G1P05496 136 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 ZFAND6Q6FIF0 208 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 LITAFQ99732 161 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 Q9UF83 564 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 NDUFA12Q9UI09 145 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 M0QXV9 152 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 CIDEAO60543 219 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 RPL36AP83881 106 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 FAM19A3Q7Z5A8 133 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 RPL36ALQ969Q0 106 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
ATPAF2-202ENST00000462733 K7EQD1 137 aa12.61□□□□□ -0.39
ATPAF2-202ENST00000462733 TRGV4A0A0C4DH28 118 aa12.6□□□□□ -0.39
ATPAF2-202ENST00000462733 F5H768 121 aa12.6□□□□□ -0.39
ATPAF2-202ENST00000462733 TCL1BO95988 128 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 SMCPP49901 116 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 MIAQ16674 131 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 DGAT2L7PQ6IED9 249 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 IGHV3-38A0A0C4DH36 116 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 HERVK_113P63121 156 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 FHL2Q14192 279 aa12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 RNASE13Q5GAN3 156 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-202ENST00000462733 DEFB131BA0A096LNP1 70 aa12.58□□□□□ -0.4
ATPAF2-202ENST00000462733 NDUFA1O15239 70 aa12.58□□□□□ -0.4
ATPAF2-202ENST00000462733 IFITM1P13164 125 aa12.58□□□□□ -0.4
ATPAF2-202ENST00000462733 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 GAGE12HA6NDE8 117 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 SCGB1C2P0DMR2 95 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 FOXI1Q12951 378 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 TEN1Q86WV5 123 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 PPDPFLQ8WWR9 84 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 SIGMAR1Q99720 223 aa12.57□□□□□ -0.4
ATPAF2-202ENST00000462733 SFTA2Q6UW10 78 aa12.56□□□□□ -0.4
ATPAF2-202ENST00000462733 GTSF1LQ9H1H1 148 aa12.56□□□□□ -0.4
ATPAF2-202ENST00000462733 IGLV5-39A0A0G2JS06 123 aa12.55□□□□□ -0.4
ATPAF2-202ENST00000462733 TRBV30A0A0K0K1B3 111 aa12.55□□□□□ -0.4
ATPAF2-202ENST00000462733 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
ATPAF2-202ENST00000462733 LINC01600Q96MT4 127 aa12.54□□□□□ -0.4
ATPAF2-202ENST00000462733 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
ATPAF2-202ENST00000462733 H7C423 109 aa12.54□□□□□ -0.4
ATPAF2-202ENST00000462733 PRO0255Q9UI72 69 aa12.54□□□□□ -0.4
ATPAF2-202ENST00000462733 PAX4O43316 350 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 CIRBPQ14011 172 aaKnown RBP12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 Q1RN00 199 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 ADAMTSL4-AS1Q5T5F5 129 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 COPS9Q8WXC6 57 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 TMEM101Q96IK0 257 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.41
ATPAF2-202ENST00000462733 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
ATPAF2-202ENST00000462733 PRSS2P07478 247 aa12.51□□□□□ -0.41
ATPAF2-202ENST00000462733 LOC100131303A0A0U1RQF7 123 aa12.51□□□□□ -0.41
ATPAF2-202ENST00000462733 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
ATPAF2-202ENST00000462733 PPDPFQ9H3Y8 114 aa12.51□□□□□ -0.41
ATPAF2-202ENST00000462733 TMEM243Q9BU79 118 aa12.5□□□□□ -0.41
ATPAF2-202ENST00000462733 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
ATPAF2-202ENST00000462733 CDC42SE2Q9NRR3 84 aa12.49□□□□□ -0.41
ATPAF2-202ENST00000462733 SLC25A20O43772 301 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 GYPEP15421 78 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms