RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 LEPROTL1O95214 131 aa4□□□□□ -1.77
NUP98-208ENST00000461047 PRSS1P07477 247 aa4□□□□□ -1.77
NUP98-208ENST00000461047 S100A2P29034 98 aa4□□□□□ -1.77
NUP98-208ENST00000461047 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
NUP98-208ENST00000461047 CFAP161Q6P656 301 aa4□□□□□ -1.77
NUP98-208ENST00000461047 Q6ZR54 194 aa4□□□□□ -1.77
NUP98-208ENST00000461047 PRR34Q9NV39 138 aa4□□□□□ -1.77
NUP98-208ENST00000461047 COL7A1Q02388 2944 aa4□□□□□ -1.77
NUP98-208ENST00000461047 IGLV4-60A0A075B6I1 120 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 TRAV13-1A0A0B4J241 112 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 IGIPA6NJ69 53 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 IFITM10A6NMD0 228 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 AKR1D1P51857 326 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 PMVKQ15126 192 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 C14orf177Q52M58 125 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 ENHOQ6UWT2 76 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 LINC00336Q6ZUF6 198 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
NUP98-208ENST00000461047 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
NUP98-208ENST00000461047 GEMIN7Q9H840 131 aaKnown RBP3.99□□□□□ -1.77
NUP98-208ENST00000461047 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 IGLV4-3A0A075B6K6 122 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 LINC00959A0A1B0GUT2 108 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 APOMO95445 188 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 PMCHL1Q16048 86 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 PDZD11Q5EBL8 140 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 COA6Q5JTJ3 125 aaKnown RBP3.98□□□□□ -1.77
NUP98-208ENST00000461047 CLPSL2Q6UWE3 100 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 CD164L2Q6UWJ8 174 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 Q6ZUT4 128 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 FAM19A2Q8N3H0 131 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
NUP98-208ENST00000461047 IFI27L1Q96BM0 104 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
NUP98-208ENST00000461047 C20orf202A1L168 122 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 H3BRM9 83 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 COX7A2LO14548 114 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 FABP4P15090 132 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 XCL1P47992 114 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 HERVK_113P63121 156 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
NUP98-208ENST00000461047 URB1-AS1Q96HZ7 61 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 AMELXQ99217 191 aa3.97□□□□□ -1.77
NUP98-208ENST00000461047 OPRPNQ99935 248 aaPredicted RBP3.97□□□□□ -1.77
NUP98-208ENST00000461047 PRKDCP78527 4128 aaKnown RBP3.96□□□□□ -1.78
NUP98-208ENST00000461047 TRAV12-1A0A0B4J245 112 aa3.96□□□□□ -1.78
NUP98-208ENST00000461047 C10orf25Q5T742 122 aa3.96□□□□□ -1.78
NUP98-208ENST00000461047 BAALCQ8WXS3 180 aa3.96□□□□□ -1.78
NUP98-208ENST00000461047 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
NUP98-208ENST00000461047 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.78
NUP98-208ENST00000461047 A0A096LNJ9 63 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.95□□□□□ -1.78
NUP98-208ENST00000461047 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 F8WDY8 70 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 H0Y8G0 127 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 PRSS2P07478 247 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 PLNP26678 52 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 UBE2D1P51668 147 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 PET117Q6UWS5 81 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 LINC01561Q8N1V8 128 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 LINC00469Q8N7U9 141 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 DNAH9Q9NYC9 4486 aa3.95□□□□□ -1.78
NUP98-208ENST00000461047 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
NUP98-208ENST00000461047 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 F8VRH5 84 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 SYS1-DBNDD2H3BUS1 97 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 NUPR1O60356 82 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 KRTDAPP60985 99 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 HERVK_113P61574 105 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 SNRPEP62304 92 aaKnown RBP3.94□□□□□ -1.78
NUP98-208ENST00000461047 TMEM170BQ5T4T1 132 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 LINC00242Q5T6M2 205 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 C5orf38Q86SI9 138 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 CHAC1Q9BUX1 264 aa3.94□□□□□ -1.78
NUP98-208ENST00000461047 A0A087WTM6 91 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 A0A087WZ39 114 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 hDV102S1A0JD36 115 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 C5orf52A6NGY3 159 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 RTL8CO15255 209 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 DPM2O94777 84 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 IGLC3P0DOY3 106 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 C6orf226Q5I0X4 101 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
NUP98-208ENST00000461047 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 SPATA12Q7Z6I5 190 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 OR10D4PQ8NGN7 298 aa3.93□□□□□ -1.78
NUP98-208ENST00000461047 HSBP1L1C9JCN9 74 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 IGKCP01834 107 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 CKS1BP61024 79 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 ZC2HC1BQ5TFG8 222 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 SFTA2Q6UW10 78 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
NUP98-208ENST00000461047 FAM104AQ969W3 186 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms