RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CHD8Q9HCK8 2581 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 CNOT1A5YKK6 2376 aaKnown RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 MYH4Q9Y623 1939 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 KNL1Q8NG31 2342 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 ACANP16112 2415 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 NSD3Q9BZ95 1437 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 TRBV6-1A0A0K0K1D8 114 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 LINC00587B1AMM8 73 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 DLEU1O43261 78 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 IFNGP01579 166 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 APOC2P02655 101 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 HMGN1P05114 100 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 IGLC1P0CG04 106 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SPRR1BP22528 89 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 S100A1P23297 94 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 GNG11P61952 73 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 S100A12P80511 92 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 Q56UQ5 140 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 RPL13AP3Q6NVV1 102 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 C5orf38Q86SI9 138 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 FAM223AQ8IWN6 122 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 FDCSPQ8NFU4 85 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 MGST2Q99735 147 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 SNRNP25Q9BV90 132 aaKnown RBP-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 NAA60Q9H7X0 242 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 TP53AIP1Q9HCN2 124 aa-0.06□□□□□ -2.42
PTPN22-203ENST00000460620 HMGXB3Q12766 1538 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 ZFHX3Q15911 3703 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 LPAP08519 4548 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 FAT3Q8TDW7 4589 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 A2ML1A8K2U0 1454 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 PXDNQ92626 1479 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 NLRP1Q9C000 1473 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SHANK2Q9UPX8 1470 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 TENM2Q9NT68 2774 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 BPTFQ12830 3046 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 KIF20BQ96Q89 1820 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 LRP2P98164 4655 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 COL4A6Q14031 1691 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 TOPAZ1Q8N9V7 1692 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 FAM223BA6NKX1 122 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 K7EQZ3 153 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 PIN1P1O15428 100 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SFT2D2O95562 160 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 TNFP01375 233 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SNCAP37840 140 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 ASIPP42127 132 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 HSD52Q0P140 79 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 Q5VSD8 79 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 C10orf113Q5VZT2 155 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 C12orf73Q69YU5 71 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 COMMD6Q7Z4G1 85 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 MYOZ3Q8TDC0 251 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SMIM4Q8WVI0 70 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 COPS9Q8WXC6 57 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 PP6455Q8WZ26 134 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 PPP3R2Q96LZ3 170 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 DPH3P1Q9H4G8 78 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 MANBALQ9NQG1 85 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SPCS1Q9Y6A9 102 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 LINC01558Q9Y6Z2 57 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 ARL2-SNX15V9GYD0 113 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 COL14A1Q05707 1796 aaKnown RBP-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 NBASA2RRP1 2371 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 FLNBO75369 2602 aaKnown RBP-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 RAPGEF6Q8TEU7 1601 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SPHKAPQ2M3C7 1700 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 MON2Q7Z3U7 1717 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 MYOM2P54296 1465 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 BCL9LQ86UU0 1499 aa-0.07□□□□□ -2.42
PTPN22-203ENST00000460620 SCAPERQ9BY12 1400 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 RGPD2P0DJD1 1756 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 A0A087WVE0 104 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 LINC00959A0A1B0GUT2 108 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 hADV29S1A0JD25 119 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 F6UZH7 168 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 UQCR11O14957 56 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 APOC3P02656 99 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 FGF7P21781 194 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 SPRR2DP22532 72 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 TPPP2P59282 170 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 UBA52P62987 128 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 Q0VG73 95 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 C1orf54Q8WWF1 131 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 LINC01600Q96MT4 127 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 NXT2Q9NPJ8 142 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 CDC42SE2Q9NRR3 84 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 GNG8Q9UK08 70 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 PAIP2BQ9ULR5 123 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 EP300Q09472 2414 aaPredicted RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 XRN1Q8IZH2 1706 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 POLA1P09884 1462 aaPredicted RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 PZPP20742 1482 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 NRKQ7Z2Y5 1582 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 LRP1BQ9NZR2 4599 aa-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 PRKDCP78527 4128 aaKnown RBP-0.08□□□□□ -2.42
PTPN22-203ENST00000460620 SRRM2Q9UQ35 2752 aaKnown RBP-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms