RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CTSGP08311 255 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 RNASE3P12724 160 aaKnown RBP2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 PDE6GP18545 87 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 PMAIP1Q13794 54 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 VMO1Q7Z5L0 202 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM223AQ8IWN6 122 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 ZFAND2AQ8N6M9 145 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 OBSCN-AS1Q96MR7 158 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 CYSTM1Q9H1C7 97 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 MED13Q9UHV7 2174 aa2.95□□□□□ -1.94
HMGB1P16-201ENST00000447155 CUL9Q8IWT3 2517 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 TRAV23DV6A0A075B6W5 121 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 A0A087WVE0 104 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 F8WEM9 126 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 CHTF8P0CG12 524 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 CCL4P13236 92 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 SNRPD3P62318 126 aaKnown RBP2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 PRR9Q5T870 116 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 MINOS1Q5TGZ0 78 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 ZGRF1Q86YA3 2104 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 ITLN2Q8WWU7 325 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 LINC00846Q9NV44 126 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 MINOS1-NBL1R4GNA1 71 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 S4R3C0 116 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 WDR87Q6ZQQ6 2873 aa2.94□□□□□ -1.94
HMGB1P16-201ENST00000447155 PANO1I0J062 215 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 M0QY20 66 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 NDUFA4O00483 81 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 INSP01308 110 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 MIFP14174 115 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 ESRGQ1W209 222 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 KLK9Q2XQG4 91 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 CCL17Q92583 94 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 KLK9Q9UKQ9 250 aa2.93□□□□□ -1.94
HMGB1P16-201ENST00000447155 H3BUA1 57 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 LECT2O14960 151 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 PRB4P10163 310 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 DAD1P61803 113 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 UBE2BP63146 152 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 ENHOQ6UWT2 76 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 CLEC19AQ6UXS0 136 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 Q6ZRU5 148 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 Q8N2B8 174 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 RNASE6Q93091 150 aaKnown RBP2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 C16orf95Q9H693 158 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 SND1-IT1Q9HBX3 110 aa2.92□□□□□ -1.94
HMGB1P16-201ENST00000447155 PLCE1Q9P212 2302 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IGHV3-66A0A0C4DH42 116 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IBA57-AS1B1ANH7 110 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 NBL1P41271 181 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 LINC00315P59091 139 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 LYPD5Q6UWN5 251 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FP248Q71RG6 208 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 FAM186AA6NE01 2351 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 ARFGEF3Q5TH69 2177 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 MUC4Q99102 2169 aa2.91□□□□□ -1.94
HMGB1P16-201ENST00000447155 IGHV3OR16-8A0A075B7F1 116 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 LOC110117498A0A087WWA1 95 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 CCL21O00585 134 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 NCR3O14931 201 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 UBE2L6O14933 153 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 NREPQ16612 68 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 LYPD2Q6UXB3 125 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 FAM19A1Q7Z5A9 133 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 Q8N6K4 173 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 USMG5Q96IX5 58 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 CDKN2A-AS1Q9UH64 79 aa2.9□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRANK1O15050 2925 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGHV3-74A0A0B4J1X5 117 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 GNRH2O43555 120 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 BSPH1Q075Z2 132 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 ZNF625Q96I27 306 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 RETNQ9HD89 108 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
HMGB1P16-201ENST00000447155 HTTP42858 3142 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 NDUFS5O43920 106 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 UBE2AP49459 152 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00158P58513 81 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 KRTAP11-1Q8IUC1 163 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 LINC00337Q8N6G1 96 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 MUC7Q8TAX7 377 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 SMIM11BQ8TCY0 68 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 COX7B2Q8TF08 81 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 RMI2Q96E14 147 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 CEP350Q5VT06 3117 aa2.88□□□□□ -1.95
HMGB1P16-201ENST00000447155 URB1O60287 2271 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms