RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 IGLV5-39A0A0G2JS06 123 aa13.13□□□□□ -0.31
CHD1L-204ENST00000431239 SCGB1A1P11684 91 aa13.13□□□□□ -0.31
CHD1L-204ENST00000431239 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
CHD1L-204ENST00000431239 LINC00308Q8TCZ7 52 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 C16orf74Q96GX8 76 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 IGLV1-51P01701 117 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 COX6CP09669 75 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 GAGE6Q13070 117 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
CHD1L-204ENST00000431239 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
CHD1L-204ENST00000431239 TIMM17BO60830 172 aa13.11□□□□□ -0.31
CHD1L-204ENST00000431239 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
CHD1L-204ENST00000431239 SOSTDC1Q6X4U4 206 aa13.11□□□□□ -0.31
CHD1L-204ENST00000431239 CIDEAO60543 219 aa13.1□□□□□ -0.31
CHD1L-204ENST00000431239 C2orf82Q6UX34 121 aa13.1□□□□□ -0.31
CHD1L-204ENST00000431239 SMR3AQ99954 134 aa13.1□□□□□ -0.31
CHD1L-204ENST00000431239 TRBV10-2A0A0K0K1G8 114 aa13.1□□□□□ -0.31
CHD1L-204ENST00000431239 IFITM1P13164 125 aa13.1□□□□□ -0.31
CHD1L-204ENST00000431239 H7C423 109 aa13.09□□□□□ -0.31
CHD1L-204ENST00000431239 CSDC2Q9Y534 153 aaKnown RBP13.09□□□□□ -0.31
CHD1L-204ENST00000431239 F5H768 121 aa13.09□□□□□ -0.31
CHD1L-204ENST00000431239 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
CHD1L-204ENST00000431239 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
CHD1L-204ENST00000431239 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
CHD1L-204ENST00000431239 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
CHD1L-204ENST00000431239 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
CHD1L-204ENST00000431239 UBE2WQ96B02 151 aa13.06□□□□□ -0.32
CHD1L-204ENST00000431239 CHCHD5Q9BSY4 110 aa13.06□□□□□ -0.32
CHD1L-204ENST00000431239 C16orf95Q9H693 158 aa13.06□□□□□ -0.32
CHD1L-204ENST00000431239 CKS1BP61024 79 aa13.05□□□□□ -0.32
CHD1L-204ENST00000431239 LST1O00453 97 aa13.05□□□□□ -0.32
CHD1L-204ENST00000431239 CRLF1O75462 422 aa13.04□□□□□ -0.32
CHD1L-204ENST00000431239 TRBV6-4A0A1B0GX49 114 aa13.04□□□□□ -0.32
CHD1L-204ENST00000431239 M0QXV9 152 aa13.04□□□□□ -0.32
CHD1L-204ENST00000431239 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
CHD1L-204ENST00000431239 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-204ENST00000431239 RNF183Q96D59 192 aa13.03□□□□□ -0.32
CHD1L-204ENST00000431239 A0A1B0GV72 72 aa13.03□□□□□ -0.32
CHD1L-204ENST00000431239 FHL2Q14192 279 aa13.03□□□□□ -0.32
CHD1L-204ENST00000431239 TMEM262E9PQX1 116 aa13.02□□□□□ -0.32
CHD1L-204ENST00000431239 TENM1Q9UKZ4 2725 aa13.01□□□□□ -0.33
CHD1L-204ENST00000431239 OVOL2Q9BRP0 275 aa13.01□□□□□ -0.33
CHD1L-204ENST00000431239 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
CHD1L-204ENST00000431239 PF4P02776 101 aa13.01□□□□□ -0.33
CHD1L-204ENST00000431239 HILS1P60008 231 aa13.01□□□□□ -0.33
CHD1L-204ENST00000431239 A0A096LPF7 62 aa13□□□□□ -0.33
CHD1L-204ENST00000431239 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
CHD1L-204ENST00000431239 KRTAP10-3P60369 221 aa13□□□□□ -0.33
CHD1L-204ENST00000431239 C11orf68Q9H3H3 251 aaKnown RBP13□□□□□ -0.33
CHD1L-204ENST00000431239 C5orf38Q86SI9 138 aa12.99□□□□□ -0.33
CHD1L-204ENST00000431239 COX7B2Q8TF08 81 aa12.99□□□□□ -0.33
CHD1L-204ENST00000431239 OTOGQ6ZRI0 2925 aa12.99□□□□□ -0.33
CHD1L-204ENST00000431239 H3BT86 120 aa12.98□□□□□ -0.33
CHD1L-204ENST00000431239 CLPSL2Q6UWE3 100 aa12.98□□□□□ -0.33
CHD1L-204ENST00000431239 MIR7-3HGQ8N6C7 128 aa12.98□□□□□ -0.33
CHD1L-204ENST00000431239 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
CHD1L-204ENST00000431239 HERV-K104P63124 156 aa12.97□□□□□ -0.33
CHD1L-204ENST00000431239 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
CHD1L-204ENST00000431239 COX7A2LO14548 114 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 GYPEP15421 78 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 LINC00158P58513 81 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 DEFB4AO15263 64 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 SNCGO76070 127 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 PFN2P35080 140 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 LINC00482Q8N8I6 264 aa12.95□□□□□ -0.34
CHD1L-204ENST00000431239 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
CHD1L-204ENST00000431239 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 ATRQ13535 2644 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 XCL1P47992 114 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 LINC01600Q96MT4 127 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
CHD1L-204ENST00000431239 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
CHD1L-204ENST00000431239 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
CHD1L-204ENST00000431239 SND1-IT1Q9HBX3 110 aa12.92□□□□□ -0.34
CHD1L-204ENST00000431239 J3QKU1 62 aa12.92□□□□□ -0.34
CHD1L-204ENST00000431239 CITED1Q99966 193 aa12.92□□□□□ -0.34
CHD1L-204ENST00000431239 CRPP02741 224 aa12.91□□□□□ -0.34
CHD1L-204ENST00000431239 Q9HAA7 133 aa12.9□□□□□ -0.34
CHD1L-204ENST00000431239 NSD1Q96L73 2696 aaPredicted RBP12.9□□□□□ -0.35
CHD1L-204ENST00000431239 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 GAGE2BQ13066 116 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 ANAPC13Q9BS18 74 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 X6R8D5 127 aa12.89□□□□□ -0.35
CHD1L-204ENST00000431239 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
CHD1L-204ENST00000431239 A0A087WZ39 114 aa12.88□□□□□ -0.35
CHD1L-204ENST00000431239 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
CHD1L-204ENST00000431239 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
CHD1L-204ENST00000431239 CCL18P55774 89 aa12.87□□□□□ -0.35
CHD1L-204ENST00000431239 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
CHD1L-204ENST00000431239 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
CHD1L-204ENST00000431239 C6orf226Q5I0X4 101 aa12.86□□□□□ -0.35
CHD1L-204ENST00000431239 Q8N3U1 123 aa12.86□□□□□ -0.35
CHD1L-204ENST00000431239 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms