RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 GAS8-AS1O95177 125 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 PRSS1P07477 247 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 LINC00694P0DN24 101 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 COL5A1-AS1Q5SY13 56 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 C18orf32Q8TCD1 76 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 GTSF1Q8WW33 167 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 DNAJC30Q96LL9 226 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 ALKBH7Q9BT30 221 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 SNHG12Q9BXW3 62 aa5.03□□□□□ -1.6
ECHDC1-207ENST00000430841 TRBV7-3A0A075B6L6 115 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 TRBV10-1A0A0K0K1A3 114 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 HIGD1CA8MV81 97 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 M0R381 172 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 LINC00614P0C842 121 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 RNASE3P12724 160 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 CTRLP40313 264 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 RPS20P60866 119 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 RIGQ13278 110 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 ZNF56Q15929 161 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 TMEM97Q5BJF2 176 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 MRPL54Q6P161 138 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 COX8CQ7Z4L0 72 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 LINC00479Q96M42 142 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 PSG8Q9UQ74 426 aa5.02□□□□□ -1.61
ECHDC1-207ENST00000430841 LRP2P98164 4655 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 TRBV6-8A0A0A6YYG3 113 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 KRTDAPP60985 99 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 MPV17L2Q567V2 206 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 OR2D3Q8NGH3 330 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 PMCHL2Q9BQD1 86 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 ST20Q9HBF5 79 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 PKIGQ9Y2B9 76 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 KIF25-AS1Q9Y6Z4 181 aa5.01□□□□□ -1.61
ECHDC1-207ENST00000430841 A0A087WYN8 130 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 FABP5P3A8MUU1 101 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 HSBP1L1C9JCN9 74 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 C3orf79P0CE67 100 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 IGLC3P0DOY3 106 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 ZNF80P51504 273 aaPredicted RBP5□□□□□ -1.61
ECHDC1-207ENST00000430841 SPATA45Q537H7 98 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 ENHOQ6UWT2 76 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 LINC01600Q96MT4 127 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 TMEM191AQ9H0A3 160 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 JPT2Q9H910 190 aa5□□□□□ -1.61
ECHDC1-207ENST00000430841 IGLV10-54A0A075B6I4 117 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 TRBV25-1A0A075B6N4 114 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 A0A1B0GUT8 65 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 DLEU1O43261 78 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 ARMS2P0C7Q2 107 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 SMIM17P0DL12 118 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 UBE2D3P61077 147 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 UBE2D2P62837 147 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 MAJINQ3KP22 176 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 SDIM1Q6ZPB5 146 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 Q86TA4 180 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 LINC00269Q8N2A0 174 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 MAP1LC3CQ9BXW4 147 aa4.99□□□□□ -1.61
ECHDC1-207ENST00000430841 IGKV2-24A0A0C4DH68 120 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 A0A0J9YXV3 536 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 LEPROTL1O95214 131 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 CHTF8P0CG12 524 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 GAGE6Q13070 117 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 KIAA1644Q3SXP7 199 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 SPACA4Q8TDM5 124 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 ORAOV1Q8WV07 137 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
ECHDC1-207ENST00000430841 TMSB15BA0A087X1C1 80 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 TRAV8-4A0A0B4J246 113 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 F2Z2F3 143 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 PANO1I0J062 215 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 UBE2L6O14933 153 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 PPBPP02775 128 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 ZNF25P17030 456 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 NTF3P20783 257 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 PRR3P79522 188 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 REG3AQ06141 175 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 RNASEKQ6P5S7 137 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 Q6ZN92 141 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 Q9UF83 564 aa4.97□□□□□ -1.61
ECHDC1-207ENST00000430841 TRAV26-2A0A0B4J265 109 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 IGHV1-24A0A0C4DH33 117 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 RBX1P62877 108 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 CIRBPQ14011 172 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 UFSP1Q6NVU6 142 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 SPINK6Q6UWN8 80 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 STPG4Q8N801 248 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 PGLYRP4Q96LB8 373 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
ECHDC1-207ENST00000430841 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
ECHDC1-207ENST00000430841 SH2D1AO60880 128 aa4.95□□□□□ -1.62
ECHDC1-207ENST00000430841 SPANXN1Q5VSR9 72 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms