RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
ACTB-204ENST00000425660 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
ACTB-204ENST00000425660 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
ACTB-204ENST00000425660 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
ACTB-204ENST00000425660 TAL2Q16559 108 aa10.42□□□□□ -0.74
ACTB-204ENST00000425660 MEGF8Q7Z7M0 2845 aa10.41□□□□□ -0.74
ACTB-204ENST00000425660 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
ACTB-204ENST00000425660 CCL25O15444 150 aa10.41□□□□□ -0.74
ACTB-204ENST00000425660 SCGB1D4Q6XE38 83 aa10.41□□□□□ -0.74
ACTB-204ENST00000425660 COL7A1Q02388 2944 aa10.41□□□□□ -0.74
ACTB-204ENST00000425660 ZFAND6Q6FIF0 208 aa10.4□□□□□ -0.74
ACTB-204ENST00000425660 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
ACTB-204ENST00000425660 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
ACTB-204ENST00000425660 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
ACTB-204ENST00000425660 Q8N3U1 123 aa10.39□□□□□ -0.75
ACTB-204ENST00000425660 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
ACTB-204ENST00000425660 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
ACTB-204ENST00000425660 CEND1Q8N111 149 aa10.38□□□□□ -0.75
ACTB-204ENST00000425660 A0A087WZ39 114 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
ACTB-204ENST00000425660 SS18Q15532 418 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
ACTB-204ENST00000425660 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 REG3AQ06141 175 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 ESRGQ1W209 222 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
ACTB-204ENST00000425660 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
ACTB-204ENST00000425660 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
ACTB-204ENST00000425660 A0A0J9YXY3 114 aa10.35□□□□□ -0.75
ACTB-204ENST00000425660 NDUFA1O15239 70 aa10.35□□□□□ -0.75
ACTB-204ENST00000425660 GCSHP23434 173 aa10.35□□□□□ -0.75
ACTB-204ENST00000425660 FXYD2P54710 66 aa10.35□□□□□ -0.75
ACTB-204ENST00000425660 CLPSL2Q6UWE3 100 aa10.35□□□□□ -0.75
ACTB-204ENST00000425660 A0A1B0GV90 55 aa10.34□□□□□ -0.75
ACTB-204ENST00000425660 A6NDN8 102 aa10.34□□□□□ -0.75
ACTB-204ENST00000425660 WFDC10BQ8IUB3 73 aa10.34□□□□□ -0.75
ACTB-204ENST00000425660 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
ACTB-204ENST00000425660 PRKDCP78527 4128 aaKnown RBP10.34□□□□□ -0.75
ACTB-204ENST00000425660 NHLRC4P0CG21 123 aaPredicted RBP10.33□□□□□ -0.76
ACTB-204ENST00000425660 XCL1P47992 114 aa10.33□□□□□ -0.76
ACTB-204ENST00000425660 CD164L2Q6UWJ8 174 aa10.33□□□□□ -0.76
ACTB-204ENST00000425660 K7EP13 123 aa10.33□□□□□ -0.76
ACTB-204ENST00000425660 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.76
ACTB-204ENST00000425660 ZNF625Q96I27 306 aaPredicted RBP10.33□□□□□ -0.76
ACTB-204ENST00000425660 LITAFQ99732 161 aa10.33□□□□□ -0.76
ACTB-204ENST00000425660 TMEM238C9JI98 176 aa10.32□□□□□ -0.76
ACTB-204ENST00000425660 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
ACTB-204ENST00000425660 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
ACTB-204ENST00000425660 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
ACTB-204ENST00000425660 TAX1BP3O14907 124 aa10.31□□□□□ -0.76
ACTB-204ENST00000425660 C5orf38Q86SI9 138 aa10.31□□□□□ -0.76
ACTB-204ENST00000425660 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
ACTB-204ENST00000425660 TIMM17BO60830 172 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 ENHOQ6UWT2 76 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 Q9H8V8 135 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 PTTG1IPP53801 180 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
ACTB-204ENST00000425660 A0A1B0GWB2 263 aa10.29□□□□□ -0.76
ACTB-204ENST00000425660 IGHV3-33P01772 117 aa10.29□□□□□ -0.76
ACTB-204ENST00000425660 Q6ZVH6 145 aa10.29□□□□□ -0.76
ACTB-204ENST00000425660 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 HERV-K104P63124 156 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 FOXI1Q12951 378 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 A6NJY4 79 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 COX7A2LO14548 114 aa10.28□□□□□ -0.76
ACTB-204ENST00000425660 IGLL5B9A064 214 aa10.27□□□□□ -0.77
ACTB-204ENST00000425660 DNAH10OSP0CZ25 163 aa10.27□□□□□ -0.77
ACTB-204ENST00000425660 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
ACTB-204ENST00000425660 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
ACTB-204ENST00000425660 NHP2Q9NX24 153 aaKnown RBP10.27□□□□□ -0.77
ACTB-204ENST00000425660 CRPP02741 224 aa10.26□□□□□ -0.77
ACTB-204ENST00000425660 SMIM13P0DJ93 91 aa10.26□□□□□ -0.77
ACTB-204ENST00000425660 MIAQ16674 131 aa10.26□□□□□ -0.77
ACTB-204ENST00000425660 LINC00588Q9Y4M8 146 aa10.26□□□□□ -0.77
ACTB-204ENST00000425660 Q8IZM0 81 aa10.26□□□□□ -0.77
ACTB-204ENST00000425660 FBN3Q75N90 2809 aa10.25□□□□□ -0.77
ACTB-204ENST00000425660 CCL18P55774 89 aa10.25□□□□□ -0.77
ACTB-204ENST00000425660 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
ACTB-204ENST00000425660 UBE2WQ96B02 151 aa10.25□□□□□ -0.77
ACTB-204ENST00000425660 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
ACTB-204ENST00000425660 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
ACTB-204ENST00000425660 K7ERJ3 54 aa10.23□□□□□ -0.77
ACTB-204ENST00000425660 MUSTN1Q8IVN3 82 aa10.23□□□□□ -0.77
ACTB-204ENST00000425660 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
ACTB-204ENST00000425660 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
ACTB-204ENST00000425660 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
ACTB-204ENST00000425660 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
ACTB-204ENST00000425660 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
ACTB-204ENST00000425660 IFITM1P13164 125 aa10.22□□□□□ -0.77
ACTB-204ENST00000425660 MALP21145 153 aa10.22□□□□□ -0.77
ACTB-204ENST00000425660 C6orf226Q5I0X4 101 aa10.22□□□□□ -0.77
ACTB-204ENST00000425660 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
ACTB-204ENST00000425660 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms