RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 EDC4Q6P2E9 1401 aaKnown RBP1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 CUX1P39880 1505 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 PEA15Q15121 130 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 SFTA2Q6UW10 78 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 CRCT1Q9UGL9 99 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 MON2Q7Z3U7 1717 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 POLA1P09884 1462 aaPredicted RBP1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 LRRC9Q6ZRR7 1453 aa1.17□□□□□ -2.22
RNU4-78P-201ENST00000410940 SPTBP11277 2137 aa1.16□□□□□ -2.22
RNU4-78P-201ENST00000410940 NCOA6Q14686 2063 aaPredicted RBP1.16□□□□□ -2.22
RNU4-78P-201ENST00000410940 H3BQF6 201 aa1.16□□□□□ -2.22
RNU4-78P-201ENST00000410940 Q6JHZ5 121 aa1.16□□□□□ -2.22
RNU4-78P-201ENST00000410940 SCN7AQ01118 1682 aa1.16□□□□□ -2.22
RNU4-78P-201ENST00000410940 TRBV6-1A0A0K0K1D8 114 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 C7orf77A4D0Y5 90 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 NMBP08949 121 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 SNRPFP62306 86 aaKnown RBP1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 LINC01600Q96MT4 127 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 S100A13Q99584 98 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 NRXN1Q9ULB1 1477 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 NUP188Q5SRE5 1749 aa1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 RRBP1Q9P2E9 1410 aaKnown RBP1.15□□□□□ -2.23
RNU4-78P-201ENST00000410940 PPLO60437 1756 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 A0A0D9SFI3 127 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 A0A0D9SG42 100 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 M0R3E3 92 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 HMGN2P05204 90 aaKnown RBP1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 ACYP1P07311 99 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 ARMS2P0C7Q2 107 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 KIF14Q15058 1648 aa1.14□□□□□ -2.23
RNU4-78P-201ENST00000410940 KANTRA0A1W2PQU2 76 aa1.13□□□□□ -2.23
RNU4-78P-201ENST00000410940 HAMPP81172 84 aa1.13□□□□□ -2.23
RNU4-78P-201ENST00000410940 KMT2BQ9UMN6 2715 aaPredicted RBP1.13□□□□□ -2.23
RNU4-78P-201ENST00000410940 C1orf167Q5SNV9 1468 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 KCPQ6ZWJ8 1503 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 C10orf142B7Z368 130 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 C10orf113Q5VZT2 155 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 CNFNQ9BYD5 112 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 HIGD1BQ9P298 99 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 SPCS1Q9Y6A9 102 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
RNU4-78P-201ENST00000410940 KDM3BQ7LBC6 1761 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 RGPD4Q7Z3J3 1758 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 F8WEM9 126 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 LINC00643Q86TS7 51 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 MUC6Q6W4X9 2439 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 LRP6O75581 1613 aa1.11□□□□□ -2.23
RNU4-78P-201ENST00000410940 ROS1P08922 2347 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 ERCC6L2Q5T890 1561 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 D6R8Y8 96 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 H0Y9P7 68 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 MUSTN1Q8IVN3 82 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 DCAF1Q9Y4B6 1507 aa1.1□□□□□ -2.23
RNU4-78P-201ENST00000410940 PDCD11Q14690 1871 aaKnown RBP1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 A0A0G2JMZ2 1700 aa1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 A0A087WVE0 104 aa1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 COX6A2Q02221 97 aa1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 ADIRFQ15847 76 aa1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 BTAF1O14981 1849 aa1.09□□□□□ -2.23
RNU4-78P-201ENST00000410940 ERVK-7P63135 1459 aa1.09□□□□□ -2.24
RNU4-78P-201ENST00000410940 MED13LQ71F56 2210 aa1.09□□□□□ -2.24
RNU4-78P-201ENST00000410940 SHPRHQ149N8 1683 aa1.09□□□□□ -2.24
RNU4-78P-201ENST00000410940 KDM5DQ9BY66 1539 aa1.09□□□□□ -2.24
RNU4-78P-201ENST00000410940 XRN1Q8IZH2 1706 aaKnown RBP1.09□□□□□ -2.24
RNU4-78P-201ENST00000410940 ZNF236Q9UL36 1845 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 DOCK11Q5JSL3 2073 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 CCDC141Q6ZP82 1450 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 LEPROTL1O95214 131 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 SPINK7P58062 85 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 NMSQ5H8A3 153 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 SSBP3-AS1Q7Z2R9 100 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 FAM103A1Q9BTL3 118 aaKnown RBP1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 ST20Q9HBF5 79 aa1.08□□□□□ -2.24
RNU4-78P-201ENST00000410940 RGPD3A6NKT7 1758 aaPredicted RBP1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 TRBV7-4A0A0J9YYF1 115 aa1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 FDCSPQ8NFU4 85 aa1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 PLAC8Q9NZF1 115 aa1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 UBE2D4Q9Y2X8 147 aa1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 F5P12259 2224 aa1.07□□□□□ -2.24
RNU4-78P-201ENST00000410940 ABCA1O95477 2261 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 WNK3Q9BYP7 1800 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 ABCC1P33527 1531 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 GNGT1P63211 74 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 PLGLAQ15195 96 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 PSENENQ9NZ42 101 aa1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 TARBP1Q13395 1621 aaKnown RBP1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 SUPT6HQ7KZ85 1726 aaKnown RBP1.06□□□□□ -2.24
RNU4-78P-201ENST00000410940 TULP4Q9NRJ4 1543 aa1.05□□□□□ -2.24
RNU4-78P-201ENST00000410940 SETBP1Q9Y6X0 1596 aa1.05□□□□□ -2.24
RNU4-78P-201ENST00000410940 ALKQ9UM73 1620 aa1.05□□□□□ -2.24
RNU4-78P-201ENST00000410940 TDRG1Q3Y452 100 aa1.05□□□□□ -2.24
RNU4-78P-201ENST00000410940 NEXMIFQ5QGS0 1516 aa1.05□□□□□ -2.24
RNU4-78P-201ENST00000410940 SAMD9Q5K651 1589 aa1.04□□□□□ -2.24
RNU4-78P-201ENST00000410940 CFAP74Q9C0B2 1584 aa1.04□□□□□ -2.24
RNU4-78P-201ENST00000410940 MYMXA0A1B0GTQ4 84 aa1.04□□□□□ -2.24
RNU4-78P-201ENST00000410940 PIGYQ3MUY2 71 aa1.04□□□□□ -2.24
RNU4-78P-201ENST00000410940 C6orf201Q7Z4U5 140 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms