RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PSPHP1O15172 72 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 CRYGDP07320 174 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 HIGD2BQ4VC39 106 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 PRR9Q5T870 116 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 RNASE3P12724 160 aaKnown RBP4.32□□□□□ -1.72
HDAC9-203ENST00000406072 UNQ9165/PRO28630Q6UXU0 137 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 ODF3BA8MYP8 253 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 CHKB-CPT1BH3BT56 60 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 TSHBP01222 138 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 A0A096LNT2 108 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 TRBV6-5A0A0K0K1A5 114 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 CCKP06307 115 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 Q8N9W7 124 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 ZFAND3Q9H8U3 227 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 KMT2BQ9UMN6 2715 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-203ENST00000406072 DCHS1Q96JQ0 3298 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 TLN1Q9Y490 2541 aaKnown RBP4.31□□□□□ -1.72
HDAC9-203ENST00000406072 A0A1W2PPR1 153 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 LY6LH3BQJ8 138 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 A6NED7 52 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 WIPF1O43516 503 aa4.31□□□□□ -1.72
HDAC9-203ENST00000406072 GPHB5Q86YW7 130 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 PKD1L2Q7Z442 2459 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 A0A096LPF7 62 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 TRBV10-1A0A0K0K1A3 114 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 PROK1P58294 105 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 Q8N3U1 123 aa4.3□□□□□ -1.72
HDAC9-203ENST00000406072 ANGP03950 147 aaKnown RBP4.29□□□□□ -1.72
HDAC9-203ENST00000406072 C6orf99Q4VX62 202 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 A0A087WYN8 130 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 PSMG3-AS1Q96PY0 264 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 IGLV10-54A0A075B6I4 117 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 CLPSL1A2RUU4 121 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 NANOS2P60321 138 aaKnown RBP4.29□□□□□ -1.72
HDAC9-203ENST00000406072 FHL2Q14192 279 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 BPESC1Q9GZL8 116 aa4.29□□□□□ -1.72
HDAC9-203ENST00000406072 NOP10Q9NPE3 64 aaKnown RBP4.29□□□□□ -1.72
HDAC9-203ENST00000406072 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 DCANP1Q8TF63 244 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 FREM2Q5SZK8 3169 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 USP9XQ93008 2570 aaPredicted RBP4.28□□□□□ -1.72
HDAC9-203ENST00000406072 HIVEP2P31629 2446 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 DSCAMO60469 2012 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 LYRM9A8MSI8 78 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
HDAC9-203ENST00000406072 ESRGQ1W209 222 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 A0A087WZ39 114 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 H3BQ85 93 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 J3QKU1 62 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 SMCR5Q8TEV8 140 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 HIVEP3Q5T1R4 2406 aa4.28□□□□□ -1.72
HDAC9-203ENST00000406072 FSHBP01225 129 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 LMO4P61968 165 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
HDAC9-203ENST00000406072 IBA57-AS1B1ANH7 110 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 K7EQD1 137 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 Q6ZQY7 126 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 Q8N2B8 174 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 IL17DQ8TAD2 202 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 CCL19Q99731 98 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 UBE2D4Q9Y2X8 147 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 CCL18P55774 89 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
HDAC9-203ENST00000406072 ITPR1Q14643 2758 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 PRYO14603 147 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 Q8N6K4 173 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 UBE2BP63146 152 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 KRTAP1-3Q8IUG1 177 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 SPEGQ15772 3267 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
HDAC9-203ENST00000406072 UBR5O95071 2799 aaPredicted RBP4.25□□□□□ -1.73
HDAC9-203ENST00000406072 C3orf84H3BNL1 204 aa4.25□□□□□ -1.73
HDAC9-203ENST00000406072 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
HDAC9-203ENST00000406072 DEFB121Q5J5C9 76 aa4.25□□□□□ -1.73
HDAC9-203ENST00000406072 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
HDAC9-203ENST00000406072 FAM30AQ9NZY2 134 aa4.25□□□□□ -1.73
HDAC9-203ENST00000406072 COX7BP24311 80 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 H3BUA1 57 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 CDK2AP2O75956 126 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 MRGPRG-AS1Q2M3A8 158 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 DEFB113Q30KQ7 82 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 C5orf56Q8N8D9 126 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 UBE2AP49459 152 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 DEFB136Q30KP8 78 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 FAM218AQ96MZ4 157 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 AMELXQ99217 191 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
HDAC9-203ENST00000406072 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
HDAC9-203ENST00000406072 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
HDAC9-203ENST00000406072 COX6A2Q02221 97 aa4.23□□□□□ -1.73
HDAC9-203ENST00000406072 C2orf48Q96LS8 159 aa4.23□□□□□ -1.73
HDAC9-203ENST00000406072 NAV2Q8IVL1 2488 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms