RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SCGB1D4Q6XE38 83 aa17.56■□□□□ 0.4
CPNE1-205ENST00000401607 B9D2Q9BPU9 175 aa17.56■□□□□ 0.4
CPNE1-205ENST00000401607 TRAV10A0A0B4J240 114 aa17.55■□□□□ 0.4
CPNE1-205ENST00000401607 IGLV5-39A0A0G2JS06 123 aa17.55■□□□□ 0.4
CPNE1-205ENST00000401607 SMIM1B2RUZ4 78 aa17.55■□□□□ 0.4
CPNE1-205ENST00000401607 CLPSL2Q6UWE3 100 aa17.53■□□□□ 0.4
CPNE1-205ENST00000401607 ORAOV1Q8WV07 137 aa17.53■□□□□ 0.4
CPNE1-205ENST00000401607 LINC00269Q8N2A0 174 aa17.52■□□□□ 0.4
CPNE1-205ENST00000401607 DNHD1Q96M86 4753 aa17.52■□□□□ 0.39
CPNE1-205ENST00000401607 IGHV3OR16-9A0A0B4J2B5 98 aa17.51■□□□□ 0.39
CPNE1-205ENST00000401607 A0A1B0GV90 55 aa17.51■□□□□ 0.39
CPNE1-205ENST00000401607 ANGP03950 147 aaKnown RBP17.51■□□□□ 0.39
CPNE1-205ENST00000401607 TAL2Q16559 108 aa17.51■□□□□ 0.39
CPNE1-205ENST00000401607 C10orf126Q8N4M7 172 aa17.51■□□□□ 0.39
CPNE1-205ENST00000401607 ZFAND6Q6FIF0 208 aa17.51■□□□□ 0.39
CPNE1-205ENST00000401607 GCSHP23434 173 aa17.5■□□□□ 0.39
CPNE1-205ENST00000401607 ESRGQ1W209 222 aa17.5■□□□□ 0.39
CPNE1-205ENST00000401607 NDUFA12Q9UI09 145 aa17.5■□□□□ 0.39
CPNE1-205ENST00000401607 CEND1Q8N111 149 aa17.49■□□□□ 0.39
CPNE1-205ENST00000401607 HIST1H4GQ99525 98 aa17.49■□□□□ 0.39
CPNE1-205ENST00000401607 FXYD2P54710 66 aa17.48■□□□□ 0.39
CPNE1-205ENST00000401607 SS18Q15532 418 aa17.48■□□□□ 0.39
CPNE1-205ENST00000401607 TM2D2Q9BX73 214 aa17.48■□□□□ 0.39
CPNE1-205ENST00000401607 REG3AQ06141 175 aa17.48■□□□□ 0.39
CPNE1-205ENST00000401607 CCL25O15444 150 aa17.47■□□□□ 0.39
CPNE1-205ENST00000401607 WFDC10BQ8IUB3 73 aa17.47■□□□□ 0.39
CPNE1-205ENST00000401607 A0A0J9YXY3 114 aa17.46■□□□□ 0.39
CPNE1-205ENST00000401607 K7EP13 123 aa17.46■□□□□ 0.39
CPNE1-205ENST00000401607 KRTAP21-3Q3LHN1 58 aa17.45■□□□□ 0.38
CPNE1-205ENST00000401607 SPANXB1Q9NS25 103 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-205ENST00000401607 A0A087WZ39 114 aa17.45■□□□□ 0.38
CPNE1-205ENST00000401607 XCL1P47992 114 aa17.45■□□□□ 0.38
CPNE1-205ENST00000401607 NDUFA1O15239 70 aa17.43■□□□□ 0.38
CPNE1-205ENST00000401607 C5orf38Q86SI9 138 aa17.43■□□□□ 0.38
CPNE1-205ENST00000401607 C15orf53Q8NAA6 179 aa17.43■□□□□ 0.38
CPNE1-205ENST00000401607 IGHV3-30P01768 117 aa17.42■□□□□ 0.38
CPNE1-205ENST00000401607 IGHV3-33P01772 117 aa17.42■□□□□ 0.38
CPNE1-205ENST00000401607 IGHV3-30-5P0DP03 117 aa17.42■□□□□ 0.38
CPNE1-205ENST00000401607 SRSF9Q13242 221 aaKnown RBP eCLIP17.42■□□□□ 0.38
CPNE1-205ENST00000401607 PRR34Q9NV39 138 aa17.42■□□□□ 0.38
CPNE1-205ENST00000401607 KLK12Q9UKR0 248 aa17.42■□□□□ 0.38
CPNE1-205ENST00000401607 Q6ZVH6 145 aa17.41■□□□□ 0.38
CPNE1-205ENST00000401607 A6NDN8 102 aa17.4■□□□□ 0.38
CPNE1-205ENST00000401607 TAX1BP3O14907 124 aa17.4■□□□□ 0.38
CPNE1-205ENST00000401607 CHCHD10Q8WYQ3 142 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-205ENST00000401607 IGLV10-54A0A075B6I4 117 aa17.4■□□□□ 0.38
CPNE1-205ENST00000401607 LITAFQ99732 161 aa17.4■□□□□ 0.38
CPNE1-205ENST00000401607 PTTG1IPP53801 180 aa17.39■□□□□ 0.37
CPNE1-205ENST00000401607 Q9H8V8 135 aa17.39■□□□□ 0.37
CPNE1-205ENST00000401607 CD164L2Q6UWJ8 174 aa17.38■□□□□ 0.37
CPNE1-205ENST00000401607 ENHOQ6UWT2 76 aa17.38■□□□□ 0.37
CPNE1-205ENST00000401607 ZNF625Q96I27 306 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-205ENST00000401607 COX7B2Q8TF08 81 aa17.38■□□□□ 0.37
CPNE1-205ENST00000401607 TMEM238C9JI98 176 aa17.37■□□□□ 0.37
CPNE1-205ENST00000401607 IGLL5B9A064 214 aa17.35■□□□□ 0.37
CPNE1-205ENST00000401607 LINC01561Q8N1V8 128 aa17.35■□□□□ 0.37
CPNE1-205ENST00000401607 NHLRC4P0CG21 123 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-205ENST00000401607 NHP2Q9NX24 153 aaKnown RBP17.35■□□□□ 0.37
CPNE1-205ENST00000401607 ADAMTSL4-AS1Q5T5F5 129 aa17.34■□□□□ 0.37
CPNE1-205ENST00000401607 TOMM7Q9P0U1 55 aa17.34■□□□□ 0.37
CPNE1-205ENST00000401607 COL7A1Q02388 2944 aa17.33■□□□□ 0.37
CPNE1-205ENST00000401607 FOXI1Q12951 378 aa17.33■□□□□ 0.37
CPNE1-205ENST00000401607 COX11Q9Y6N1 276 aa17.33■□□□□ 0.37
CPNE1-205ENST00000401607 K7ERJ3 54 aa17.33■□□□□ 0.36
CPNE1-205ENST00000401607 COX7A2LO14548 114 aa17.32■□□□□ 0.36
CPNE1-205ENST00000401607 TIMM17BO60830 172 aa17.32■□□□□ 0.36
CPNE1-205ENST00000401607 LINC01556Q5JQF7 62 aa17.32■□□□□ 0.36
CPNE1-205ENST00000401607 UBE2WQ96B02 151 aa17.32■□□□□ 0.36
CPNE1-205ENST00000401607 CRPP02741 224 aa17.31■□□□□ 0.36
CPNE1-205ENST00000401607 SPANXDQ9BXN6 97 aa17.31■□□□□ 0.36
CPNE1-205ENST00000401607 SPANXCQ9NY87 97 aa17.31■□□□□ 0.36
CPNE1-205ENST00000401607 LINC00588Q9Y4M8 146 aa17.31■□□□□ 0.36
CPNE1-205ENST00000401607 SMIM13P0DJ93 91 aa17.3■□□□□ 0.36
CPNE1-205ENST00000401607 GAGE12HA6NDE8 117 aa17.3■□□□□ 0.36
CPNE1-205ENST00000401607 HERV-K104P63124 156 aa17.3■□□□□ 0.36
CPNE1-205ENST00000401607 A0A1B0GWB2 263 aa17.29■□□□□ 0.36
CPNE1-205ENST00000401607 MUSTN1Q8IVN3 82 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 RAB37Q96AX2 223 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 TMEM238LA0A1B0GVL6 79 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 A6NJY4 79 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 DNAH10OSP0CZ25 163 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 MIAQ16674 131 aa17.28■□□□□ 0.36
CPNE1-205ENST00000401607 TRAV8-4A0A0B4J246 113 aa17.27■□□□□ 0.35
CPNE1-205ENST00000401607 Q8IZM0 81 aa17.26■□□□□ 0.35
CPNE1-205ENST00000401607 CCL18P55774 89 aa17.25■□□□□ 0.35
CPNE1-205ENST00000401607 MALP21145 153 aa17.25■□□□□ 0.35
CPNE1-205ENST00000401607 CIRBPQ14011 172 aaKnown RBP17.25■□□□□ 0.35
CPNE1-205ENST00000401607 PRKDCP78527 4128 aaKnown RBP17.24■□□□□ 0.35
CPNE1-205ENST00000401607 MEIG1Q5JSS6 88 aa17.24■□□□□ 0.35
CPNE1-205ENST00000401607 DAND5Q8N907 189 aa17.24■□□□□ 0.35
CPNE1-205ENST00000401607 C9orf118A6NHY6 69 aa17.23■□□□□ 0.35
CPNE1-205ENST00000401607 KIAA0087Q14695 138 aa17.23■□□□□ 0.35
CPNE1-205ENST00000401607 A4D1N5 150 aa17.23■□□□□ 0.35
CPNE1-205ENST00000401607 PRSS2P07478 247 aa17.23■□□□□ 0.35
CPNE1-205ENST00000401607 C6orf226Q5I0X4 101 aa17.23■□□□□ 0.35
CPNE1-205ENST00000401607 A0A0U1RRA0 63 aa17.22■□□□□ 0.35
CPNE1-205ENST00000401607 KRTAP26-1Q6PEX3 210 aa17.22■□□□□ 0.35
CPNE1-205ENST00000401607 DYNC2H1Q8NCM8 4307 aaKnown RBP17.21■□□□□ 0.35
CPNE1-205ENST00000401607 RPL24P83731 157 aaKnown RBP17.21■□□□□ 0.35
CPNE1-205ENST00000401607 NAA38Q9BRA0 125 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms