RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 F8W1H4 67 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 C1orf43Q9BWL3 253 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 A0A1B0GV72 72 aa10.08□□□□□ -0.8
SCAF4-202ENST00000399804 PRB2P02812 416 aaPredicted RBP10.08□□□□□ -0.8
SCAF4-202ENST00000399804 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
SCAF4-202ENST00000399804 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
SCAF4-202ENST00000399804 SND1-IT1Q9HBX3 110 aa10.07□□□□□ -0.8
SCAF4-202ENST00000399804 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
SCAF4-202ENST00000399804 TIRAPP58753 221 aa10.07□□□□□ -0.8
SCAF4-202ENST00000399804 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
SCAF4-202ENST00000399804 ITPR2Q14571 2701 aa10.06□□□□□ -0.8
SCAF4-202ENST00000399804 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
SCAF4-202ENST00000399804 H7C423 109 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 CCL18P55774 89 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 Q9UF83 564 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 REG3AQ06141 175 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
SCAF4-202ENST00000399804 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
SCAF4-202ENST00000399804 RELNP78509 3460 aa10.04□□□□□ -0.8
SCAF4-202ENST00000399804 MRPS36P82909 103 aaKnown RBP10.04□□□□□ -0.8
SCAF4-202ENST00000399804 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
SCAF4-202ENST00000399804 UTP20O75691 2785 aaKnown RBP10.04□□□□□ -0.8
SCAF4-202ENST00000399804 UBE2D1P51668 147 aa10.04□□□□□ -0.8
SCAF4-202ENST00000399804 FHL2Q14192 279 aa10.04□□□□□ -0.8
SCAF4-202ENST00000399804 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
SCAF4-202ENST00000399804 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
SCAF4-202ENST00000399804 ZANQ9Y493 2812 aa10.03□□□□□ -0.8
SCAF4-202ENST00000399804 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
SCAF4-202ENST00000399804 MIAQ16674 131 aa10.03□□□□□ -0.8
SCAF4-202ENST00000399804 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
SCAF4-202ENST00000399804 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.8
SCAF4-202ENST00000399804 KRTAP1-1Q07627 177 aa10.02□□□□□ -0.8
SCAF4-202ENST00000399804 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
SCAF4-202ENST00000399804 PTH2Q96A98 100 aa10.02□□□□□ -0.81
SCAF4-202ENST00000399804 SPENQ96T58 3664 aaKnown RBP10.01□□□□□ -0.81
SCAF4-202ENST00000399804 RETNQ9HD89 108 aa10.01□□□□□ -0.81
SCAF4-202ENST00000399804 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
SCAF4-202ENST00000399804 LINC01546A6NGU7 62 aa10.01□□□□□ -0.81
SCAF4-202ENST00000399804 CARD19Q96LW7 228 aa10.01□□□□□ -0.81
SCAF4-202ENST00000399804 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
SCAF4-202ENST00000399804 TSPAN13O95857 204 aa10□□□□□ -0.81
SCAF4-202ENST00000399804 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
SCAF4-202ENST00000399804 RMI2Q96E14 147 aa10□□□□□ -0.81
SCAF4-202ENST00000399804 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
SCAF4-202ENST00000399804 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
SCAF4-202ENST00000399804 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
SCAF4-202ENST00000399804 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
SCAF4-202ENST00000399804 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
SCAF4-202ENST00000399804 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
SCAF4-202ENST00000399804 AMELXQ99217 191 aa9.99□□□□□ -0.81
SCAF4-202ENST00000399804 NDUFA1O15239 70 aa9.98□□□□□ -0.81
SCAF4-202ENST00000399804 UBR5O95071 2799 aaPredicted RBP9.98□□□□□ -0.81
SCAF4-202ENST00000399804 SPATA25Q9BR10 227 aa9.98□□□□□ -0.81
SCAF4-202ENST00000399804 LAMTOR3Q9UHA4 124 aa9.98□□□□□ -0.81
SCAF4-202ENST00000399804 HRNRQ86YZ3 2850 aaPredicted RBP9.98□□□□□ -0.81
SCAF4-202ENST00000399804 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
SCAF4-202ENST00000399804 GHRHP01286 108 aa9.98□□□□□ -0.81
SCAF4-202ENST00000399804 SETXQ7Z333 2677 aaKnown RBP9.98□□□□□ -0.81
SCAF4-202ENST00000399804 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 CR1P17927 2039 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 CRYBG3Q68DQ2 2970 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 CXCL5P42830 114 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 NKAPP1Q8N9T2 125 aa9.97□□□□□ -0.81
SCAF4-202ENST00000399804 COX6A2Q02221 97 aa9.96□□□□□ -0.81
SCAF4-202ENST00000399804 LINC00308Q8TCZ7 52 aa9.96□□□□□ -0.81
SCAF4-202ENST00000399804 SVEP1Q4LDE5 3571 aa9.96□□□□□ -0.82
SCAF4-202ENST00000399804 LINC01620Q4KN68 170 aa9.96□□□□□ -0.82
SCAF4-202ENST00000399804 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.82
SCAF4-202ENST00000399804 CLEC2BQ92478 149 aa9.96□□□□□ -0.82
SCAF4-202ENST00000399804 RNF183Q96D59 192 aa9.96□□□□□ -0.82
SCAF4-202ENST00000399804 A0A0B4J2C4 111 aa9.95□□□□□ -0.82
SCAF4-202ENST00000399804 A0A0J9YWU9 116 aa9.95□□□□□ -0.82
SCAF4-202ENST00000399804 NANOS2P60321 138 aaKnown RBP9.95□□□□□ -0.82
SCAF4-202ENST00000399804 LELP1Q5T871 98 aa9.95□□□□□ -0.82
SCAF4-202ENST00000399804 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
SCAF4-202ENST00000399804 KRTAP24-1Q3LI83 254 aa9.94□□□□□ -0.82
SCAF4-202ENST00000399804 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
SCAF4-202ENST00000399804 TCL1BO95988 128 aa9.94□□□□□ -0.82
SCAF4-202ENST00000399804 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
SCAF4-202ENST00000399804 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 CITED1Q99966 193 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
SCAF4-202ENST00000399804 NTM-AS1Q6ZSK4 140 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 STAB1Q9NY15 2570 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 A8MTW9 85 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 GAGE2AQ6NT46 116 aa9.93□□□□□ -0.82
SCAF4-202ENST00000399804 BAALC-AS2P0C853 105 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 CD164L2Q6UWJ8 174 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 SPANXCQ9NY87 97 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 ZNF575Q86XF7 245 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 APCP25054 2843 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
SCAF4-202ENST00000399804 Q6ZTC4 211 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms