RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
CYLD-202ENST00000398568 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
CYLD-202ENST00000398568 UBE2D4Q9Y2X8 147 aa10.92□□□□□ -0.66
CYLD-202ENST00000398568 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
CYLD-202ENST00000398568 LINC00336Q6ZUF6 198 aa10.92□□□□□ -0.66
CYLD-202ENST00000398568 PIMREGQ9BSJ6 248 aa10.92□□□□□ -0.66
CYLD-202ENST00000398568 TRBV12-3P01733 135 aa10.91□□□□□ -0.66
CYLD-202ENST00000398568 PKIGQ9Y2B9 76 aa10.91□□□□□ -0.66
CYLD-202ENST00000398568 SERP1Q9Y6X1 66 aa10.91□□□□□ -0.66
CYLD-202ENST00000398568 PF4P02776 101 aa10.91□□□□□ -0.66
CYLD-202ENST00000398568 RPL28P46779 137 aaKnown RBP10.9□□□□□ -0.66
CYLD-202ENST00000398568 TRAV23DV6A0A075B6W5 121 aa10.9□□□□□ -0.66
CYLD-202ENST00000398568 F8WDY8 70 aa10.89□□□□□ -0.67
CYLD-202ENST00000398568 IGHV3-11P01762 117 aa10.89□□□□□ -0.67
CYLD-202ENST00000398568 RPL35AP18077 110 aaKnown RBP10.88□□□□□ -0.67
CYLD-202ENST00000398568 PIK3CD-AS1Q5SR53 167 aa10.88□□□□□ -0.67
CYLD-202ENST00000398568 CCL19Q99731 98 aa10.88□□□□□ -0.67
CYLD-202ENST00000398568 HILS1P60008 231 aa10.88□□□□□ -0.67
CYLD-202ENST00000398568 CHCHD7Q9BUK0 85 aa10.88□□□□□ -0.67
CYLD-202ENST00000398568 HTN1P15515 57 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 PDZD2O15018 2839 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 H0YGX0 51 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 NCR3O14931 201 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 PROK1P58294 105 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
CYLD-202ENST00000398568 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.67
CYLD-202ENST00000398568 XCL1P47992 114 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
CYLD-202ENST00000398568 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
CYLD-202ENST00000398568 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
CYLD-202ENST00000398568 A0A087WYN8 130 aa10.86□□□□□ -0.67
CYLD-202ENST00000398568 PSMB8P28062 276 aa10.86□□□□□ -0.67
CYLD-202ENST00000398568 CYSRT1A8MQ03 144 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 KNCNA6PVL3 124 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 COX6A2Q02221 97 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 IGHV3-38A0A0C4DH36 116 aa10.85□□□□□ -0.67
CYLD-202ENST00000398568 LECT2O14960 151 aa10.84□□□□□ -0.67
CYLD-202ENST00000398568 C5orf56Q8N8D9 126 aa10.84□□□□□ -0.67
CYLD-202ENST00000398568 ZNF469Q96JG9 3925 aaPredicted RBP10.84□□□□□ -0.67
CYLD-202ENST00000398568 SAA4P35542 130 aa10.84□□□□□ -0.67
CYLD-202ENST00000398568 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.84□□□□□ -0.67
CYLD-202ENST00000398568 WFDC9Q8NEX5 89 aa10.84□□□□□ -0.67
CYLD-202ENST00000398568 OTOGQ6ZRI0 2925 aa10.83□□□□□ -0.68
CYLD-202ENST00000398568 SMIM26A0A096LP01 95 aa10.83□□□□□ -0.68
CYLD-202ENST00000398568 SNRPD3P62318 126 aaKnown RBP10.83□□□□□ -0.68
CYLD-202ENST00000398568 OBSCN-AS1Q96MR7 158 aa10.83□□□□□ -0.68
CYLD-202ENST00000398568 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
CYLD-202ENST00000398568 WFDC11Q8NEX6 87 aa10.82□□□□□ -0.68
CYLD-202ENST00000398568 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
CYLD-202ENST00000398568 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
CYLD-202ENST00000398568 CCKP06307 115 aa10.82□□□□□ -0.68
CYLD-202ENST00000398568 ENHOQ6UWT2 76 aa10.82□□□□□ -0.68
CYLD-202ENST00000398568 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
CYLD-202ENST00000398568 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
CYLD-202ENST00000398568 MOB4Q9Y3A3 225 aa10.81□□□□□ -0.68
CYLD-202ENST00000398568 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
CYLD-202ENST00000398568 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
CYLD-202ENST00000398568 FAM19A1Q7Z5A9 133 aa10.81□□□□□ -0.68
CYLD-202ENST00000398568 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
CYLD-202ENST00000398568 C19orf54Q5BKX5 351 aa10.8□□□□□ -0.68
CYLD-202ENST00000398568 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
CYLD-202ENST00000398568 SIRPDQ9H106 197 aa10.8□□□□□ -0.68
CYLD-202ENST00000398568 ORMDL1Q9P0S3 153 aa10.8□□□□□ -0.68
CYLD-202ENST00000398568 F8P00451 2351 aa10.8□□□□□ -0.68
CYLD-202ENST00000398568 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 SLPIP03973 132 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 ZFP36P26651 326 aaKnown RBP10.79□□□□□ -0.68
CYLD-202ENST00000398568 JMJD1CQ15652 2540 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 MIR7-3HGQ8N6C7 128 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 TMEM86BQ8N661 226 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 V9GYY9 64 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
CYLD-202ENST00000398568 Q9UF83 564 aa10.78□□□□□ -0.68
CYLD-202ENST00000398568 LINC00158P58513 81 aa10.77□□□□□ -0.69
CYLD-202ENST00000398568 C11orf71Q6IPW1 123 aa10.77□□□□□ -0.69
CYLD-202ENST00000398568 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.69
CYLD-202ENST00000398568 H7BZZ5 65 aa10.77□□□□□ -0.69
CYLD-202ENST00000398568 BRK1Q8WUW1 75 aa10.77□□□□□ -0.69
CYLD-202ENST00000398568 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
CYLD-202ENST00000398568 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.69
CYLD-202ENST00000398568 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
CYLD-202ENST00000398568 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
CYLD-202ENST00000398568 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
CYLD-202ENST00000398568 SEC61GP60059 68 aa10.76□□□□□ -0.69
CYLD-202ENST00000398568 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 EDN2P20800 178 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 Q6ZSN1 163 aa10.75□□□□□ -0.69
CYLD-202ENST00000398568 ZFHX3Q15911 3703 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 TRBV10-3A0A0K0K1G6 114 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 TOMM7Q9P0U1 55 aa10.74□□□□□ -0.69
CYLD-202ENST00000398568 IGHV4-30-2A0A087WSY4 118 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 316.2 ms