RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 TRIAP1O43715 76 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 LY6G6DO95868 133 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ2Q13117 558 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ4Q86SG3 579 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 DAZ3Q9NR90 486 aaKnown RBP7.46□□□□□ -1.21
CPSF1P1-201ENST00000397477 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 ICOSQ9Y6W8 199 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 SMCPP49901 116 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 MIAQ16674 131 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 PPDPFLQ8WWR9 84 aa7.45□□□□□ -1.22
CPSF1P1-201ENST00000397477 PAX4O43316 350 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 F5H768 121 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 HILS1P60008 231 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 FHL3Q13643 280 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 CITED1Q99966 193 aa7.44□□□□□ -1.22
CPSF1P1-201ENST00000397477 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 UBE2D3P61077 147 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 UBE2D2P62837 147 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 CARD19Q96LW7 228 aa7.43□□□□□ -1.22
CPSF1P1-201ENST00000397477 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 CDC42SE2Q9NRR3 84 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
CPSF1P1-201ENST00000397477 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 GIG44P09565 113 aaPredicted RBP7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 NOTCH1P46531 2555 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 DAD1P61803 113 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CPSF1P1-201ENST00000397477 CRPP02741 224 aa7.4□□□□□ -1.22
CPSF1P1-201ENST00000397477 MALP21145 153 aa7.4□□□□□ -1.22
CPSF1P1-201ENST00000397477 VWFP04275 2813 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 SNCGO76070 127 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 TIRAPP58753 221 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 COX7B2Q8TF08 81 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPATA25Q9BR10 227 aa7.4□□□□□ -1.23
CPSF1P1-201ENST00000397477 NDUFA1O15239 70 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 A8MTW9 85 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 XGP55808 180 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 Q9HAA7 133 aa7.39□□□□□ -1.23
CPSF1P1-201ENST00000397477 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 FHL2Q14192 279 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 DNAL4O96015 105 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 KRTAP10-3P60369 221 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV6-4A0A1B0GX49 114 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 SS18Q15532 418 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 LITAFQ99732 161 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CPSF1P1-201ENST00000397477 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 LINC00269Q8N2A0 174 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 IFITM1P13164 125 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 Q8N3U1 123 aa7.37□□□□□ -1.23
CPSF1P1-201ENST00000397477 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 ATP5G1P05496 136 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 PRO0255Q9UI72 69 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 C9orf66Q5T8R8 295 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 C19orf73Q9NVV2 129 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 OTOGQ6ZRI0 2925 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 NSD1Q96L73 2696 aaPredicted RBP7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 PLAC8L1A1L4L8 177 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 EDA2RQ9HAV5 297 aa7.35□□□□□ -1.23
CPSF1P1-201ENST00000397477 H7C423 109 aa7.34□□□□□ -1.23
CPSF1P1-201ENST00000397477 IGHV4-28A0A0C4DH34 117 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms