RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 M0QXV9 152 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 COX6A2Q02221 97 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 TRBV30A0A0K0K1B3 111 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 LOC100131303A0A0U1RQF7 123 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 H7C423 109 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 DAND5Q8N907 189 aa16.93■□□□□ 0.3
PABPN1-202ENST00000397276 C2orf82Q6UX34 121 aa16.92■□□□□ 0.3
PABPN1-202ENST00000397276 ICOSQ9Y6W8 199 aa16.92■□□□□ 0.3
PABPN1-202ENST00000397276 FN1P02751 2386 aaKnown RBP16.91■□□□□ 0.3
PABPN1-202ENST00000397276 CMC4P56277 68 aaPredicted RBP16.91■□□□□ 0.3
PABPN1-202ENST00000397276 TTC32Q5I0X7 151 aa16.91■□□□□ 0.3
PABPN1-202ENST00000397276 TRAV13-1A0A0B4J241 112 aa16.91■□□□□ 0.3
PABPN1-202ENST00000397276 UBE2WQ96B02 151 aa16.91■□□□□ 0.3
PABPN1-202ENST00000397276 C16orf74Q96GX8 76 aa16.9■□□□□ 0.3
PABPN1-202ENST00000397276 PF4P02776 101 aa16.89■□□□□ 0.3
PABPN1-202ENST00000397276 DAZ2Q13117 558 aaKnown RBP16.89■□□□□ 0.3
PABPN1-202ENST00000397276 CSNK1G2-AS1Q8NCQ2 148 aa16.89■□□□□ 0.29
PABPN1-202ENST00000397276 TRBV10-1A0A0K0K1A3 114 aa16.89■□□□□ 0.29
PABPN1-202ENST00000397276 RPL13AP40429 203 aaKnown RBP16.89■□□□□ 0.29
PABPN1-202ENST00000397276 LY6G6DO95868 133 aa16.88■□□□□ 0.29
PABPN1-202ENST00000397276 IFITM1P13164 125 aa16.88■□□□□ 0.29
PABPN1-202ENST00000397276 DAZ4Q86SG3 579 aaKnown RBP16.87■□□□□ 0.29
PABPN1-202ENST00000397276 DAZ3Q9NR90 486 aaKnown RBP16.87■□□□□ 0.29
PABPN1-202ENST00000397276 TMEM101Q96IK0 257 aa16.86■□□□□ 0.29
PABPN1-202ENST00000397276 LINC00242Q5T6M2 205 aa16.86■□□□□ 0.29
PABPN1-202ENST00000397276 TRGV4A0A0C4DH28 118 aa16.85■□□□□ 0.29
PABPN1-202ENST00000397276 ZNF625Q96I27 306 aaPredicted RBP16.85■□□□□ 0.29
PABPN1-202ENST00000397276 VWFP04275 2813 aa16.84■□□□□ 0.29
PABPN1-202ENST00000397276 NBEAL2Q6ZNJ1 2754 aa16.84■□□□□ 0.29
PABPN1-202ENST00000397276 FAM110AQ9BQ89 295 aa16.83■□□□□ 0.29
PABPN1-202ENST00000397276 A0A0U1RRA0 63 aa16.83■□□□□ 0.28
PABPN1-202ENST00000397276 TIRAPP58753 221 aa16.83■□□□□ 0.28
PABPN1-202ENST00000397276 MIAQ16674 131 aa16.83■□□□□ 0.28
PABPN1-202ENST00000397276 OTOGQ6ZRI0 2925 aa16.83■□□□□ 0.28
PABPN1-202ENST00000397276 UBE2L6O14933 153 aa16.82■□□□□ 0.28
PABPN1-202ENST00000397276 DEFB130BP0DP73 79 aa16.82■□□□□ 0.28
PABPN1-202ENST00000397276 DEFB130AP0DP74 79 aa16.82■□□□□ 0.28
PABPN1-202ENST00000397276 SPATA3Q8NHX4 192 aa16.82■□□□□ 0.28
PABPN1-202ENST00000397276 SPANXDQ9BXN6 97 aa16.81■□□□□ 0.28
PABPN1-202ENST00000397276 SPANXCQ9NY87 97 aa16.81■□□□□ 0.28
PABPN1-202ENST00000397276 CDC42SE2Q9NRR3 84 aa16.81■□□□□ 0.28
PABPN1-202ENST00000397276 HERVK_113P63121 156 aa16.8■□□□□ 0.28
PABPN1-202ENST00000397276 LINC01600Q96MT4 127 aa16.8■□□□□ 0.28
PABPN1-202ENST00000397276 IGKV3OR2-268A0A0C4DH90 116 aa16.8■□□□□ 0.28
PABPN1-202ENST00000397276 IGLV5-45A0A087WSX0 123 aa16.79■□□□□ 0.28
PABPN1-202ENST00000397276 INAFM1C9JVW0 142 aa16.79■□□□□ 0.28
PABPN1-202ENST00000397276 OVOL2Q9BRP0 275 aa16.79■□□□□ 0.28
PABPN1-202ENST00000397276 TMEM243Q9BU79 118 aa16.79■□□□□ 0.28
PABPN1-202ENST00000397276 COX6CP09669 75 aa16.78■□□□□ 0.28
PABPN1-202ENST00000397276 Q9H8V8 135 aa16.78■□□□□ 0.28
PABPN1-202ENST00000397276 LINC00482Q8N8I6 264 aa16.78■□□□□ 0.28
PABPN1-202ENST00000397276 LST1O00453 97 aa16.77■□□□□ 0.28
PABPN1-202ENST00000397276 C3orf56Q8N813 242 aa16.77■□□□□ 0.28
PABPN1-202ENST00000397276 FHL2Q14192 279 aa16.77■□□□□ 0.27
PABPN1-202ENST00000397276 TRBV6-4A0A1B0GX49 114 aa16.76■□□□□ 0.27
PABPN1-202ENST00000397276 Q6Q795 121 aa16.76■□□□□ 0.27
PABPN1-202ENST00000397276 CSDC2Q9Y534 153 aaKnown RBP16.76■□□□□ 0.27
PABPN1-202ENST00000397276 CHCHD5Q9BSY4 110 aa16.76■□□□□ 0.27
PABPN1-202ENST00000397276 SMIM1B2RUZ4 78 aa16.75■□□□□ 0.27
PABPN1-202ENST00000397276 H3BT86 120 aa16.75■□□□□ 0.27
PABPN1-202ENST00000397276 NDUFA1O15239 70 aa16.74■□□□□ 0.27
PABPN1-202ENST00000397276 IGLV5-39A0A0G2JS06 123 aa16.72■□□□□ 0.27
PABPN1-202ENST00000397276 TENM1Q9UKZ4 2725 aa16.71■□□□□ 0.27
PABPN1-202ENST00000397276 SMIM20Q8N5G0 67 aa16.71■□□□□ 0.26
PABPN1-202ENST00000397276 IGLV4-60A0A075B6I1 120 aa16.7■□□□□ 0.26
PABPN1-202ENST00000397276 CIRBPQ14011 172 aaKnown RBP16.69■□□□□ 0.26
PABPN1-202ENST00000397276 PRIMA1Q86XR5 153 aa16.69■□□□□ 0.26
PABPN1-202ENST00000397276 MEIG1Q5JSS6 88 aa16.68■□□□□ 0.26
PABPN1-202ENST00000397276 TRBV6-8A0A0A6YYG3 113 aa16.68■□□□□ 0.26
PABPN1-202ENST00000397276 F5H768 121 aa16.68■□□□□ 0.26
PABPN1-202ENST00000397276 DEFB4AO15263 64 aa16.67■□□□□ 0.26
PABPN1-202ENST00000397276 FAM19A3Q7Z5A8 133 aa16.67■□□□□ 0.26
PABPN1-202ENST00000397276 A0A096LPF7 62 aa16.66■□□□□ 0.26
PABPN1-202ENST00000397276 TRRAPQ9Y4A5 3859 aa16.66■□□□□ 0.26
PABPN1-202ENST00000397276 DEFB121Q5J5C9 76 aa16.66■□□□□ 0.26
PABPN1-202ENST00000397276 TIMM17BO60830 172 aa16.66■□□□□ 0.26
PABPN1-202ENST00000397276 LINC00308Q8TCZ7 52 aa16.66■□□□□ 0.26
PABPN1-202ENST00000397276 NSD1Q96L73 2696 aaPredicted RBP16.65■□□□□ 0.26
PABPN1-202ENST00000397276 SOSTDC1Q6X4U4 206 aa16.65■□□□□ 0.26
PABPN1-202ENST00000397276 TOMM7Q9P0U1 55 aa16.65■□□□□ 0.26
PABPN1-202ENST00000397276 X6R8D5 127 aa16.65■□□□□ 0.26
PABPN1-202ENST00000397276 GYPEP15421 78 aa16.63■□□□□ 0.25
PABPN1-202ENST00000397276 SMCR5Q8TEV8 140 aa16.63■□□□□ 0.25
PABPN1-202ENST00000397276 FAM240AA0A1B0GVK7 77 aa16.62■□□□□ 0.25
PABPN1-202ENST00000397276 HERV-K104P63124 156 aa16.62■□□□□ 0.25
PABPN1-202ENST00000397276 DEFB135Q30KP9 77 aa16.61■□□□□ 0.25
PABPN1-202ENST00000397276 KIR2DL5BQ8NHK3 375 aa16.6■□□□□ 0.25
PABPN1-202ENST00000397276 ATRQ13535 2644 aa16.6■□□□□ 0.25
PABPN1-202ENST00000397276 HIVEP1P15822 2718 aa16.6■□□□□ 0.25
PABPN1-202ENST00000397276 FAM222AQ5U5X8 452 aa16.6■□□□□ 0.25
PABPN1-202ENST00000397276 FAM236AA0A1B0GUQ0 79 aa16.59■□□□□ 0.25
PABPN1-202ENST00000397276 FAM236BA0A1B0GV22 79 aa16.59■□□□□ 0.25
PABPN1-202ENST00000397276 MRPL23Q16540 153 aaKnown RBP16.59■□□□□ 0.25
PABPN1-202ENST00000397276 C9orf66Q5T8R8 295 aa16.59■□□□□ 0.25
PABPN1-202ENST00000397276 SHISA2Q6UWI4 295 aa16.59■□□□□ 0.25
PABPN1-202ENST00000397276 TRBV7-7A0A0K0K1E9 115 aa16.58■□□□□ 0.24
PABPN1-202ENST00000397276 C5orf38Q86SI9 138 aa16.58■□□□□ 0.24
PABPN1-202ENST00000397276 COX7A2LO14548 114 aa16.57■□□□□ 0.24
PABPN1-202ENST00000397276 FAM218AQ96MZ4 157 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms