RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SPANXDQ9BXN6 97 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 SPANXCQ9NY87 97 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
SNX6-202ENST00000396526 DEFB4AO15263 64 aa11.33□□□□□ -0.6
SNX6-202ENST00000396526 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
SNX6-202ENST00000396526 Q9H8V8 135 aa11.33□□□□□ -0.6
SNX6-202ENST00000396526 ERG28Q9UKR5 140 aa11.33□□□□□ -0.6
SNX6-202ENST00000396526 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
SNX6-202ENST00000396526 A0A0B4J2C4 111 aa11.33□□□□□ -0.6
SNX6-202ENST00000396526 HERV-K104P63124 156 aa11.33□□□□□ -0.6
SNX6-202ENST00000396526 A8MZ25 164 aa11.32□□□□□ -0.6
SNX6-202ENST00000396526 MIAQ16674 131 aa11.32□□□□□ -0.6
SNX6-202ENST00000396526 PRIMA1Q86XR5 153 aa11.32□□□□□ -0.6
SNX6-202ENST00000396526 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
SNX6-202ENST00000396526 Q1RN00 199 aa11.32□□□□□ -0.6
SNX6-202ENST00000396526 F8W1H4 67 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 PSMB2P49721 201 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 MEIG1Q5JSS6 88 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 F5H768 121 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 TSPAN13O95857 204 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 SH2D6Q7Z4S9 175 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 KRTAP24-1Q3LI83 254 aa11.31□□□□□ -0.6
SNX6-202ENST00000396526 SS18Q15532 418 aa11.3□□□□□ -0.6
SNX6-202ENST00000396526 TRBV20-1A0A075B6N2 111 aa11.3□□□□□ -0.6
SNX6-202ENST00000396526 Q8NAQ8 132 aa11.3□□□□□ -0.6
SNX6-202ENST00000396526 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
SNX6-202ENST00000396526 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
SNX6-202ENST00000396526 OCIAD2Q56VL3 154 aa11.3□□□□□ -0.6
SNX6-202ENST00000396526 IGLV4-60A0A075B6I1 120 aa11.29□□□□□ -0.6
SNX6-202ENST00000396526 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
SNX6-202ENST00000396526 H3BMG7 143 aa11.28□□□□□ -0.6
SNX6-202ENST00000396526 HTN3P15516 51 aa11.28□□□□□ -0.6
SNX6-202ENST00000396526 A0A096LPF7 62 aa11.28□□□□□ -0.6
SNX6-202ENST00000396526 LITAFQ99732 161 aa11.28□□□□□ -0.6
SNX6-202ENST00000396526 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.6
SNX6-202ENST00000396526 RBX1P62877 108 aa11.27□□□□□ -0.61
SNX6-202ENST00000396526 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
SNX6-202ENST00000396526 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
SNX6-202ENST00000396526 H7C2G1 150 aa11.27□□□□□ -0.61
SNX6-202ENST00000396526 ADAMTSL4-AS1Q5T5F5 129 aa11.27□□□□□ -0.61
SNX6-202ENST00000396526 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
SNX6-202ENST00000396526 IGHV3-33P01772 117 aa11.26□□□□□ -0.61
SNX6-202ENST00000396526 COX7B2Q8TF08 81 aa11.26□□□□□ -0.61
SNX6-202ENST00000396526 COX6CP09669 75 aa11.25□□□□□ -0.61
SNX6-202ENST00000396526 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
SNX6-202ENST00000396526 LINC00959A0A1B0GUT2 108 aa11.25□□□□□ -0.61
SNX6-202ENST00000396526 J3QR89 54 aa11.25□□□□□ -0.61
SNX6-202ENST00000396526 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
SNX6-202ENST00000396526 NPC2P61916 151 aa11.24□□□□□ -0.61
SNX6-202ENST00000396526 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
SNX6-202ENST00000396526 CELA1Q9UNI1 258 aa11.24□□□□□ -0.61
SNX6-202ENST00000396526 A0A087WZ39 114 aa11.23□□□□□ -0.61
SNX6-202ENST00000396526 IGHV3OR16-9A0A0B4J2B5 98 aa11.23□□□□□ -0.61
SNX6-202ENST00000396526 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
SNX6-202ENST00000396526 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
SNX6-202ENST00000396526 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
SNX6-202ENST00000396526 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
SNX6-202ENST00000396526 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.62
SNX6-202ENST00000396526 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.62
SNX6-202ENST00000396526 DAND5Q8N907 189 aa11.21□□□□□ -0.62
SNX6-202ENST00000396526 XCL1P47992 114 aa11.2□□□□□ -0.62
SNX6-202ENST00000396526 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
SNX6-202ENST00000396526 TENM1Q9UKZ4 2725 aa11.2□□□□□ -0.62
SNX6-202ENST00000396526 VWFP04275 2813 aa11.2□□□□□ -0.62
SNX6-202ENST00000396526 WFDC2Q14508 124 aa11.19□□□□□ -0.62
SNX6-202ENST00000396526 LELP1Q5T871 98 aa11.19□□□□□ -0.62
SNX6-202ENST00000396526 NBEAL2Q6ZNJ1 2754 aa11.19□□□□□ -0.62
SNX6-202ENST00000396526 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
SNX6-202ENST00000396526 TRBV30A0A0K0K1B3 111 aa11.18□□□□□ -0.62
SNX6-202ENST00000396526 KRTAP10-11P60412 298 aa11.18□□□□□ -0.62
SNX6-202ENST00000396526 LINC00158P58513 81 aa11.18□□□□□ -0.62
SNX6-202ENST00000396526 TCL1BO95988 128 aa11.17□□□□□ -0.62
SNX6-202ENST00000396526 ATXN8Q156A1 80 aa11.17□□□□□ -0.62
SNX6-202ENST00000396526 LINC00269Q8N2A0 174 aa11.17□□□□□ -0.62
SNX6-202ENST00000396526 CLPSL2Q6UWE3 100 aa11.17□□□□□ -0.62
SNX6-202ENST00000396526 ETDBQ3ZM63 59 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 IBA57-AS1B1ANH7 110 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
SNX6-202ENST00000396526 REG3AQ06141 175 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 MALP21145 153 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 CD164L2Q6UWJ8 174 aa11.16□□□□□ -0.62
SNX6-202ENST00000396526 COX7A2LO14548 114 aa11.15□□□□□ -0.62
SNX6-202ENST00000396526 CFAP161Q6P656 301 aa11.15□□□□□ -0.62
SNX6-202ENST00000396526 MTURNQ8N3F0 131 aa11.14□□□□□ -0.63
SNX6-202ENST00000396526 CKS1BP61024 79 aa11.14□□□□□ -0.63
SNX6-202ENST00000396526 G3V4G9 280 aa11.14□□□□□ -0.63
SNX6-202ENST00000396526 H3BNG1 76 aa11.14□□□□□ -0.63
SNX6-202ENST00000396526 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
SNX6-202ENST00000396526 Q8IZM0 81 aa11.13□□□□□ -0.63
SNX6-202ENST00000396526 MIR7-3HGQ8N6C7 128 aa11.13□□□□□ -0.63
SNX6-202ENST00000396526 CHCHD10Q8WYQ3 142 aaPredicted RBP11.13□□□□□ -0.63
SNX6-202ENST00000396526 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
SNX6-202ENST00000396526 C11orf68Q9H3H3 251 aaKnown RBP11.13□□□□□ -0.63
SNX6-202ENST00000396526 TRIAP1O43715 76 aa11.12□□□□□ -0.63
SNX6-202ENST00000396526 CXCL5P42830 114 aa11.12□□□□□ -0.63
SNX6-202ENST00000396526 TRAV13-2A0A0B4J235 113 aa11.12□□□□□ -0.63
SNX6-202ENST00000396526 RETNQ9HD89 108 aa11.12□□□□□ -0.63
SNX6-202ENST00000396526 C9JAW5 83 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms