RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 C18orf65Q6ZTR6 163 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 COX8CQ7Z4L0 72 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
RFFL-202ENST00000394597 IGLV2-18A0A075B6J9 118 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 ENHOQ6UWT2 76 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
RFFL-202ENST00000394597 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 CFAP54Q96N23 3096 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 IGHV3-16A0A0C4DH30 117 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 C6orf226Q5I0X4 101 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 C11orf21Q9P2W6 132 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
RFFL-202ENST00000394597 ATRQ13535 2644 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 CFHR3Q02985 330 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 HIST2H2BDQ6DRA6 164 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 IGLV4-69A0A075B6H9 119 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 A8MZ25 164 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 DAD1P61803 113 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 ZFAND2AQ8N6M9 145 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 Q6JHZ5 121 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 C16orf95Q9H693 158 aa4.18□□□□□ -1.74
RFFL-202ENST00000394597 NOP10Q9NPE3 64 aaKnown RBP4.18□□□□□ -1.74
RFFL-202ENST00000394597 NCR3O14931 201 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 LINC00308Q8TCZ7 52 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 DCANP1Q8TF63 244 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 IGIPA6NJ69 53 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 WIPF1O43516 503 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 C16orf74Q96GX8 76 aa4.17□□□□□ -1.74
RFFL-202ENST00000394597 FSHBP01225 129 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 UBE2DNLQ8IWF7 75 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 Q8N2B8 174 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 RETNQ9HD89 108 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 USP24Q9UPU5 2620 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 ATP5EP2Q5VTU8 51 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 FRYLO94915 3013 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 ACANP16112 2415 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 A0A096LNT2 108 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 F8WEM9 126 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
RFFL-202ENST00000394597 KLK9Q2XQG4 91 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 CDKN2A-AS1Q9UH64 79 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 MAST4O15021 2626 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 DSPP15924 2871 aaKnown RBP4.16□□□□□ -1.74
RFFL-202ENST00000394597 SLPIP03973 132 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 EDN2P20800 178 aa4.16□□□□□ -1.74
RFFL-202ENST00000394597 IGHV4-4A0A075B6R2 117 aa4.15□□□□□ -1.74
RFFL-202ENST00000394597 XCL1P47992 114 aa4.15□□□□□ -1.74
RFFL-202ENST00000394597 POLR2KP53803 58 aaKnown RBP4.15□□□□□ -1.74
RFFL-202ENST00000394597 SOSTDC1Q6X4U4 206 aa4.15□□□□□ -1.74
RFFL-202ENST00000394597 ESM1Q9NQ30 184 aa4.15□□□□□ -1.74
RFFL-202ENST00000394597 TRBV27A0A0K0K1C4 114 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 CRYGDP07320 174 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 MIR7-3HGQ8N6C7 128 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 KLLNB2CW77 178 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 MRPS36P82909 103 aaKnown RBP4.15□□□□□ -1.75
RFFL-202ENST00000394597 PIK3CD-AS1Q5SR53 167 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 FAM19A4Q96LR4 140 aa4.15□□□□□ -1.75
RFFL-202ENST00000394597 POM121L12Q8N7R1 296 aa4.14□□□□□ -1.75
RFFL-202ENST00000394597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.14□□□□□ -1.75
RFFL-202ENST00000394597 F8WDY8 70 aa4.14□□□□□ -1.75
RFFL-202ENST00000394597 PRR9Q5T870 116 aa4.14□□□□□ -1.75
RFFL-202ENST00000394597 COX7B2Q8TF08 81 aa4.14□□□□□ -1.75
RFFL-202ENST00000394597 NDUFC1O43677 76 aa4.14□□□□□ -1.75
RFFL-202ENST00000394597 TMEM256-PLSCR3K7ERE1 68 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 NDUFA1O15239 70 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 FUSP35637 526 aaKnown RBP eCLIP4.13□□□□□ -1.75
RFFL-202ENST00000394597 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
RFFL-202ENST00000394597 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 C9orf85Q96MD7 179 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 LINC00846Q9NV44 126 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 PSCAO43653 123 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
RFFL-202ENST00000394597 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 TSHBP01222 138 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 SPART-AS1P0CW21 52 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 RNASE3P12724 160 aaKnown RBP4.12□□□□□ -1.75
RFFL-202ENST00000394597 K7EQD1 137 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 PROK1P58294 105 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 DEFB135Q30KP9 77 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 M0QY20 66 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 CELSR3Q9NYQ7 3312 aa4.12□□□□□ -1.75
RFFL-202ENST00000394597 IGLV1-51P01701 117 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 SCXQ7RTU7 201 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 SMCR5Q8TEV8 140 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 SS18Q15532 418 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 C5orf38Q86SI9 138 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 TRBV7-6A0A0J9YX20 115 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 ODF3L2Q3SX64 289 aa4.11□□□□□ -1.75
RFFL-202ENST00000394597 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms