RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LINC00269Q8N2A0 174 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 HIGD1BQ9P298 99 aa5.94□□□□□ -1.46
TDP1-203ENST00000393454 LINC00959A0A1B0GUT2 108 aa5.93□□□□□ -1.46
TDP1-203ENST00000393454 SS18Q15532 418 aa5.93□□□□□ -1.46
TDP1-203ENST00000393454 HSD52Q0P140 79 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 ESRGQ1W209 222 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 IGHV3-30P01768 117 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 IGHV3-33P01772 117 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 XCL1P47992 114 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 LBHQ53QV2 105 aaPredicted RBP5.92□□□□□ -1.46
TDP1-203ENST00000393454 BVES-AS1Q5T3Y7 98 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 HIST1H4GQ99525 98 aa5.92□□□□□ -1.46
TDP1-203ENST00000393454 DNAH9Q9NYC9 4486 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 IGLL5B9A064 214 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 CCL25O15444 150 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 GCSHP23434 173 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 REG3AQ06141 175 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 C15orf53Q8NAA6 179 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 NDUFA12Q9UI09 145 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 KLK12Q9UKR0 248 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
TDP1-203ENST00000393454 IGLV10-54A0A075B6I4 117 aa5.9□□□□□ -1.46
TDP1-203ENST00000393454 SMIM1B2RUZ4 78 aa5.9□□□□□ -1.46
TDP1-203ENST00000393454 COL5A1-AS1Q5SY13 56 aa5.9□□□□□ -1.46
TDP1-203ENST00000393454 C5orf38Q86SI9 138 aa5.9□□□□□ -1.46
TDP1-203ENST00000393454 WFDC10BQ8IUB3 73 aa5.9□□□□□ -1.46
TDP1-203ENST00000393454 NHLRC4P0CG21 123 aaPredicted RBP5.9□□□□□ -1.47
TDP1-203ENST00000393454 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.47
TDP1-203ENST00000393454 ORAOV1Q8WV07 137 aa5.9□□□□□ -1.47
TDP1-203ENST00000393454 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 IGHV3OR16-9A0A0B4J2B5 98 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 IGLV5-39A0A0G2JS06 123 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 PTTG1IPP53801 180 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 CHCHD10Q8WYQ3 142 aaPredicted RBP5.89□□□□□ -1.47
TDP1-203ENST00000393454 TOMM7Q9P0U1 55 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 CRPP02741 224 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 ZFAND6Q6FIF0 208 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 CEND1Q8N111 149 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 UBE2WQ96B02 151 aa5.89□□□□□ -1.47
TDP1-203ENST00000393454 A0A087WZ39 114 aa5.88□□□□□ -1.47
TDP1-203ENST00000393454 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
TDP1-203ENST00000393454 TAL2Q16559 108 aa5.88□□□□□ -1.47
TDP1-203ENST00000393454 C10orf126Q8N4M7 172 aa5.88□□□□□ -1.47
TDP1-203ENST00000393454 CCL18P55774 89 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 COX7B2Q8TF08 81 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 Q9H8V8 135 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 A0A1B0GV90 55 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 A6NDN8 102 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 K7EP13 123 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 COX7A2LO14548 114 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 NDUFA1O15239 70 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 MALP21145 153 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 FXYD2P54710 66 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 ENHOQ6UWT2 76 aa5.87□□□□□ -1.47
TDP1-203ENST00000393454 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
TDP1-203ENST00000393454 GAGE12HA6NDE8 117 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 TM2D2Q9BX73 214 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 LINC00588Q9Y4M8 146 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 MEGF8Q7Z7M0 2845 aa5.86□□□□□ -1.47
TDP1-203ENST00000393454 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
TDP1-203ENST00000393454 PRSS2P07478 247 aa5.85□□□□□ -1.47
TDP1-203ENST00000393454 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
TDP1-203ENST00000393454 C6orf226Q5I0X4 101 aa5.85□□□□□ -1.47
TDP1-203ENST00000393454 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
TDP1-203ENST00000393454 NHP2Q9NX24 153 aaKnown RBP5.85□□□□□ -1.47
TDP1-203ENST00000393454 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 SMIM13P0DJ93 91 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 FOXI1Q12951 378 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 MEIG1Q5JSS6 88 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 Q6ZVH6 145 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 RAB37Q96AX2 223 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 HERV-K104P63124 156 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 MIAQ16674 131 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 ADAMTSL4-AS1Q5T5F5 129 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.47
TDP1-203ENST00000393454 TMEM238LA0A1B0GVL6 79 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 A6NJY4 79 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 K7ERJ3 54 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 TAX1BP3O14907 124 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 DNAH10OSP0CZ25 163 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 NPC2P61916 151 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 APOMO95445 188 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 DAND5Q8N907 189 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 LITAFQ99732 161 aa5.83□□□□□ -1.48
TDP1-203ENST00000393454 TIMM17BO60830 172 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 CKS1BP61024 79 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 UBE2DNLQ8IWF7 75 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 Q8IZM0 81 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 C1orf43Q9BWL3 253 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 Q9HAA7 133 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
TDP1-203ENST00000393454 KLK5Q9Y337 293 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 241.6 ms