RNA–Protein interactions for RNA: ENST00000383897.1

RNU1-39P-201, Transcript of RNA, U1 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU1-39P, Length 165 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-39P-201ENST00000383897 TRBV7-4A0A0J9YYF1 115 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 I3L2K1 104 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 COX6B1P14854 86 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 SEC11AP67812 179 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 C10orf113Q5VZT2 155 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 AP4S1Q9Y587 144 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 ZNF292O60281 2723 aa0.21□□□□□ -2.38
RNU1-39P-201ENST00000383897 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
RNU1-39P-201ENST00000383897 LINC00846Q9NV44 126 aa0.2□□□□□ -2.38
RNU1-39P-201ENST00000383897 ROBO1Q9Y6N7 1651 aa0.2□□□□□ -2.38
RNU1-39P-201ENST00000383897 HMGXB3Q12766 1538 aa0.19□□□□□ -2.38
RNU1-39P-201ENST00000383897 SPRR1AP35321 89 aa0.19□□□□□ -2.38
RNU1-39P-201ENST00000383897 GOLGA4Q13439 2230 aaKnown RBP0.19□□□□□ -2.38
RNU1-39P-201ENST00000383897 DIP2CQ9Y2E4 1556 aa0.19□□□□□ -2.38
RNU1-39P-201ENST00000383897 PLXNB2O15031 1838 aa0.18□□□□□ -2.38
RNU1-39P-201ENST00000383897 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
RNU1-39P-201ENST00000383897 ABCA2Q9BZC7 2435 aa0.18□□□□□ -2.38
RNU1-39P-201ENST00000383897 ARHGEF12Q9NZN5 1544 aa0.18□□□□□ -2.38
RNU1-39P-201ENST00000383897 HRNRQ86YZ3 2850 aaPredicted RBP0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 MAGI1Q96QZ7 1491 aaPredicted RBP0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 SHROOM2Q13796 1616 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 TRAV30A0A087WSZ9 112 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 FAM223BA6NKX1 122 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 LINC00032P0C843 101 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 DEFB123Q8N688 67 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 USMG5Q96IX5 58 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 LINC01600Q96MT4 127 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 NSD3Q9BZ95 1437 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 PSME4Q14997 1843 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
RNU1-39P-201ENST00000383897 MRC2Q9UBG0 1479 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 SETBP1Q9Y6X0 1596 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 hADV29S1A0JD25 119 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 GNGT2O14610 69 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 MPC2O95563 127 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 PMCHL1Q16048 86 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 SFTA2Q6UW10 78 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 KDM5AP29375 1690 aaKnown RBP0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 PLCE1Q9P212 2302 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 PTPRQQ9UMZ3 2332 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 TCHHQ07283 1943 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 DOPEY2Q9Y3R5 2298 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 GAPVD1Q14C86 1478 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 CCDC141Q6ZP82 1450 aa0.16□□□□□ -2.38
RNU1-39P-201ENST00000383897 ANK2Q01484 3957 aa0.15□□□□□ -2.38
RNU1-39P-201ENST00000383897 SPINK4O60575 86 aa0.15□□□□□ -2.39
RNU1-39P-201ENST00000383897 COX8AP10176 69 aa0.15□□□□□ -2.39
RNU1-39P-201ENST00000383897 ACBD7Q8N6N7 88 aa0.15□□□□□ -2.39
RNU1-39P-201ENST00000383897 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
RNU1-39P-201ENST00000383897 MYO7BQ6PIF6 2116 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 PAPPAQ13219 1627 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 SPHKAPQ2M3C7 1700 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 H3BQF6 201 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 SYS1-DBNDD2H3BUS1 97 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 RBP2P50120 134 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 C14orf144Q96I85 54 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 CACFD1Q9UGQ2 172 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 ADGRL2O95490 1459 aa0.14□□□□□ -2.39
RNU1-39P-201ENST00000383897 ZFYVE16Q7Z3T8 1539 aa0.13□□□□□ -2.39
RNU1-39P-201ENST00000383897 TET3O43151 1660 aa0.13□□□□□ -2.39
RNU1-39P-201ENST00000383897 LAMC1P11047 1609 aa0.13□□□□□ -2.39
RNU1-39P-201ENST00000383897 PPRC1Q5VV67 1664 aaKnown RBP0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 ARHGEF5Q12774 1597 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 C1orf167Q5SNV9 1468 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 C7orf77A4D0Y5 90 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 ATP6V1G2-DDX39BF2Z307 99 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 ATOX1O00244 68 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 UQCRHP07919 91 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 S100A10P60903 97 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 PSMG4Q5JS54 123 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 ABCC5O15440 1437 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 NCOR1O75376 2440 aa0.12□□□□□ -2.39
RNU1-39P-201ENST00000383897 PEG3Q9GZU2 1588 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 TRBV25-1A0A075B6N4 114 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 TRGV9Q99603 122 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 PMCHL2Q9BQD1 86 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 DPY30Q9C005 99 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 TOP2BQ02880 1626 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 TULP4Q9NRJ4 1543 aa0.11□□□□□ -2.39
RNU1-39P-201ENST00000383897 PIEZO2Q9H5I5 2752 aa0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 A0A0G2JND7 137 aa0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 LINC00959A0A1B0GUT2 108 aa0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 SPRR1BP22528 89 aa0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 WNK2Q9Y3S1 2297 aa0.1□□□□□ -2.39
RNU1-39P-201ENST00000383897 ABCC2Q92887 1545 aa0.09□□□□□ -2.39
RNU1-39P-201ENST00000383897 USF3Q68DE3 2245 aa0.09□□□□□ -2.39
RNU1-39P-201ENST00000383897 SPTBN1Q01082 2364 aaKnown RBP0.09□□□□□ -2.39
RNU1-39P-201ENST00000383897 CACNA1AO00555 2505 aa0.09□□□□□ -2.39
RNU1-39P-201ENST00000383897 A0A1B0GU69 56 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 ALKAL2Q6UX46 152 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 SERP2Q8N6R1 65 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 FLNCQ14315 2725 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 FYCO1Q9BQS8 1478 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 MLH3Q9UHC1 1453 aa0.09□□□□□ -2.4
RNU1-39P-201ENST00000383897 TENM4Q6N022 2769 aa0.08□□□□□ -2.4
RNU1-39P-201ENST00000383897 A0A0G2JMZ2 1700 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms