RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 ANAPC13Q9BS18 74 aa14.47□□□□□ -0.09
CLN5-201ENST00000377453 GCN1Q92616 2671 aaKnown RBP14.47□□□□□ -0.09
CLN5-201ENST00000377453 C15orf53Q8NAA6 179 aa14.46□□□□□ -0.09
CLN5-201ENST00000377453 TIMM17BO60830 172 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 SNCGO76070 127 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 FN1P02751 2386 aaKnown RBP14.45□□□□□ -0.1
CLN5-201ENST00000377453 CIRBPQ14011 172 aaKnown RBP14.45□□□□□ -0.1
CLN5-201ENST00000377453 CDC42SE2Q9NRR3 84 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 PDZD2O15018 2839 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 F5H768 121 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 IFITM1P13164 125 aa14.45□□□□□ -0.1
CLN5-201ENST00000377453 FASNP49327 2511 aaKnown RBP14.43□□□□□ -0.1
CLN5-201ENST00000377453 TRGV2A0A075B6R0 118 aa14.43□□□□□ -0.1
CLN5-201ENST00000377453 NHLRC4P0CG21 123 aaPredicted RBP14.43□□□□□ -0.1
CLN5-201ENST00000377453 GAGE2BQ13066 116 aa14.43□□□□□ -0.1
CLN5-201ENST00000377453 GAGE6Q13070 117 aa14.43□□□□□ -0.1
CLN5-201ENST00000377453 GAGE2EQ4V326 116 aa14.43□□□□□ -0.1
CLN5-201ENST00000377453 GAGE2DQ9UEU5 116 aa14.43□□□□□ -0.1
CLN5-201ENST00000377453 TOMM7Q9P0U1 55 aa14.42□□□□□ -0.1
CLN5-201ENST00000377453 PLAC8L1A1L4L8 177 aa14.42□□□□□ -0.1
CLN5-201ENST00000377453 UNC79Q9P2D8 2635 aa14.41□□□□□ -0.1
CLN5-201ENST00000377453 H3BT86 120 aa14.41□□□□□ -0.1
CLN5-201ENST00000377453 UBE2L6O14933 153 aa14.4□□□□□ -0.1
CLN5-201ENST00000377453 DAZ2Q13117 558 aaKnown RBP14.4□□□□□ -0.1
CLN5-201ENST00000377453 DAZ4Q86SG3 579 aaKnown RBP14.4□□□□□ -0.1
CLN5-201ENST00000377453 DAZ3Q9NR90 486 aaKnown RBP14.4□□□□□ -0.1
CLN5-201ENST00000377453 FAM218AQ96MZ4 157 aa14.39□□□□□ -0.11
CLN5-201ENST00000377453 TMEM243Q9BU79 118 aa14.39□□□□□ -0.11
CLN5-201ENST00000377453 IGLV4-60A0A075B6I1 120 aa14.38□□□□□ -0.11
CLN5-201ENST00000377453 LINC01600Q96MT4 127 aa14.38□□□□□ -0.11
CLN5-201ENST00000377453 TRBV10-1A0A0K0K1A3 114 aa14.37□□□□□ -0.11
CLN5-201ENST00000377453 TRAV25A0A0B4J276 109 aa14.36□□□□□ -0.11
CLN5-201ENST00000377453 NDUFV3P56181 108 aaKnown RBP14.36□□□□□ -0.11
CLN5-201ENST00000377453 NBEAL2Q6ZNJ1 2754 aa14.35□□□□□ -0.11
CLN5-201ENST00000377453 COX7A2LO14548 114 aa14.35□□□□□ -0.11
CLN5-201ENST00000377453 C11orf68Q9H3H3 251 aaKnown RBP14.35□□□□□ -0.11
CLN5-201ENST00000377453 TRGV4A0A0C4DH28 118 aa14.35□□□□□ -0.11
CLN5-201ENST00000377453 Q9HAA7 133 aa14.35□□□□□ -0.11
CLN5-201ENST00000377453 CSDC2Q9Y534 153 aaKnown RBP14.35□□□□□ -0.11
CLN5-201ENST00000377453 SHISA2Q6UWI4 295 aa14.34□□□□□ -0.11
CLN5-201ENST00000377453 MIR7-3HGQ8N6C7 128 aa14.34□□□□□ -0.11
CLN5-201ENST00000377453 SS18L2Q9UHA2 77 aa14.34□□□□□ -0.11
CLN5-201ENST00000377453 LINC01006Q8NI28 216 aa14.33□□□□□ -0.11
CLN5-201ENST00000377453 B5MCH6 92 aa14.33□□□□□ -0.12
CLN5-201ENST00000377453 CCDC179H3BU77 68 aa14.33□□□□□ -0.12
CLN5-201ENST00000377453 FAM19A3Q7Z5A8 133 aa14.33□□□□□ -0.12
CLN5-201ENST00000377453 C5orf38Q86SI9 138 aa14.32□□□□□ -0.12
CLN5-201ENST00000377453 LRRC75A-AS1Q8N1F1 130 aa14.32□□□□□ -0.12
CLN5-201ENST00000377453 C19orf73Q9NVV2 129 aa14.32□□□□□ -0.12
CLN5-201ENST00000377453 LINC00337Q8N6G1 96 aa14.31□□□□□ -0.12
CLN5-201ENST00000377453 CHCHD5Q9BSY4 110 aa14.31□□□□□ -0.12
CLN5-201ENST00000377453 DEFB130BP0DP73 79 aa14.3□□□□□ -0.12
CLN5-201ENST00000377453 DEFB130AP0DP74 79 aa14.3□□□□□ -0.12
CLN5-201ENST00000377453 COX7B2Q8TF08 81 aa14.3□□□□□ -0.12
CLN5-201ENST00000377453 PFN2P35080 140 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 C22orf24Q9Y442 160 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 IGKV2-28A0A075B6P5 120 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 IGKV2D-28P01615 120 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 TMEM86BQ8N661 226 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 C16orf74Q96GX8 76 aa14.29□□□□□ -0.12
CLN5-201ENST00000377453 LINC00158P58513 81 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 CLPSL2Q6UWE3 100 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 CSNK1G2-AS1Q8NCQ2 148 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 ANK3Q12955 4377 aaKnown RBP14.28□□□□□ -0.12
CLN5-201ENST00000377453 A0A096LPF7 62 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 BAALC-AS2P0C853 105 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 FHL2Q14192 279 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 SMCR5Q8TEV8 140 aa14.28□□□□□ -0.12
CLN5-201ENST00000377453 DEFB121Q5J5C9 76 aa14.27□□□□□ -0.13
CLN5-201ENST00000377453 SVIPQ8NHG7 77 aa14.27□□□□□ -0.13
CLN5-201ENST00000377453 J3QKU1 62 aa14.27□□□□□ -0.13
CLN5-201ENST00000377453 HERV-K104P63124 156 aa14.26□□□□□ -0.13
CLN5-201ENST00000377453 SND1-IT1Q9HBX3 110 aa14.26□□□□□ -0.13
CLN5-201ENST00000377453 TRBV6-8A0A0A6YYG3 113 aa14.25□□□□□ -0.13
CLN5-201ENST00000377453 IGLV1-51P01701 117 aa14.25□□□□□ -0.13
CLN5-201ENST00000377453 TRBV6-4A0A1B0GX49 114 aa14.24□□□□□ -0.13
CLN5-201ENST00000377453 C9orf129Q5T035 196 aaKnown RBP14.24□□□□□ -0.13
CLN5-201ENST00000377453 CRPP02741 224 aa14.24□□□□□ -0.13
CLN5-201ENST00000377453 KRTAP1-1Q07627 177 aa14.24□□□□□ -0.13
CLN5-201ENST00000377453 A0A087WYN8 130 aa14.23□□□□□ -0.13
CLN5-201ENST00000377453 C3orf56Q8N813 242 aa14.23□□□□□ -0.13
CLN5-201ENST00000377453 ATP5G1P05496 136 aa14.23□□□□□ -0.13
CLN5-201ENST00000377453 CCL18P55774 89 aa14.23□□□□□ -0.13
CLN5-201ENST00000377453 IGHV3OR16-9A0A0B4J2B5 98 aa14.22□□□□□ -0.13
CLN5-201ENST00000377453 SMIM11BQ8TCY0 68 aa14.22□□□□□ -0.13
CLN5-201ENST00000377453 XCL1P47992 114 aa14.21□□□□□ -0.13
CLN5-201ENST00000377453 COPS9Q8WXC6 57 aa14.2□□□□□ -0.14
CLN5-201ENST00000377453 OVOL2Q9BRP0 275 aa14.2□□□□□ -0.14
CLN5-201ENST00000377453 FAM240AA0A1B0GVK7 77 aa14.2□□□□□ -0.14
CLN5-201ENST00000377453 Q6Q795 121 aa14.2□□□□□ -0.14
CLN5-201ENST00000377453 SMR3AQ99954 134 aa14.2□□□□□ -0.14
CLN5-201ENST00000377453 OTOGQ6ZRI0 2925 aa14.19□□□□□ -0.14
CLN5-201ENST00000377453 TRACP01848 142 aa14.19□□□□□ -0.14
CLN5-201ENST00000377453 VWFP04275 2813 aa14.19□□□□□ -0.14
CLN5-201ENST00000377453 SPATA3Q8NHX4 192 aa14.18□□□□□ -0.14
CLN5-201ENST00000377453 Q8N3U1 123 aa14.18□□□□□ -0.14
CLN5-201ENST00000377453 DEFB4AO15263 64 aa14.17□□□□□ -0.14
CLN5-201ENST00000377453 GYPEP15421 78 aa14.17□□□□□ -0.14
CLN5-201ENST00000377453 TRAV13-2A0A0B4J235 113 aa14.17□□□□□ -0.14
CLN5-201ENST00000377453 SLPIP03973 132 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms