RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SPTBN4Q9H254 2564 aa11.68□□□□□ -0.54
TRIM39-201ENST00000376656 IGKV3D-7A0A0C4DH55 119 aa11.68□□□□□ -0.54
TRIM39-201ENST00000376656 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
TRIM39-201ENST00000376656 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 UBE2L6O14933 153 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 DEFB114Q30KQ6 69 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 LINC01356Q8N9X3 169 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 CYSTM1Q9H1C7 97 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 ATOX1O00244 68 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 LINC00158P58513 81 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 NOTCH3Q9UM47 2321 aa11.67□□□□□ -0.54
TRIM39-201ENST00000376656 hADV29S1A0JD25 119 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 LINC00846Q9NV44 126 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 CRYGAP11844 174 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 TMEM243Q9BU79 118 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 CCL18P55774 89 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
TRIM39-201ENST00000376656 Q6YL49 198 aa11.65□□□□□ -0.54
TRIM39-201ENST00000376656 OVOL2Q9BRP0 275 aa11.65□□□□□ -0.54
TRIM39-201ENST00000376656 LECT2O14960 151 aa11.65□□□□□ -0.55
TRIM39-201ENST00000376656 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.55
TRIM39-201ENST00000376656 UTP20O75691 2785 aaKnown RBP11.64□□□□□ -0.55
TRIM39-201ENST00000376656 A0A087WVE0 104 aa11.64□□□□□ -0.55
TRIM39-201ENST00000376656 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
TRIM39-201ENST00000376656 RPL18AQ02543 176 aaKnown RBP11.64□□□□□ -0.55
TRIM39-201ENST00000376656 NCR3O14931 201 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 STHQ8IWL8 128 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 SLPIP03973 132 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 A0A1B0GX51 115 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
TRIM39-201ENST00000376656 NOP10Q9NPE3 64 aaKnown RBP11.62□□□□□ -0.55
TRIM39-201ENST00000376656 H0YGX0 51 aa11.62□□□□□ -0.55
TRIM39-201ENST00000376656 J3KT08 172 aa11.62□□□□□ -0.55
TRIM39-201ENST00000376656 PFN2P35080 140 aa11.62□□□□□ -0.55
TRIM39-201ENST00000376656 Q6JHZ5 121 aa11.62□□□□□ -0.55
TRIM39-201ENST00000376656 FLNCQ14315 2725 aa11.62□□□□□ -0.55
TRIM39-201ENST00000376656 WNK1Q9H4A3 2382 aa11.61□□□□□ -0.55
TRIM39-201ENST00000376656 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
TRIM39-201ENST00000376656 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
TRIM39-201ENST00000376656 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
TRIM39-201ENST00000376656 A0A096LNT2 108 aa11.6□□□□□ -0.55
TRIM39-201ENST00000376656 FAM19A5Q7Z5A7 132 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-201ENST00000376656 OR13C6PQ8NH95 151 aa11.6□□□□□ -0.55
TRIM39-201ENST00000376656 POLQO75417 2590 aa11.6□□□□□ -0.55
TRIM39-201ENST00000376656 USP9XQ93008 2570 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-201ENST00000376656 J3QLI3 93 aa11.59□□□□□ -0.55
TRIM39-201ENST00000376656 PAX4O43316 350 aa11.59□□□□□ -0.55
TRIM39-201ENST00000376656 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
TRIM39-201ENST00000376656 AKAP9Q99996 3911 aa11.59□□□□□ -0.55
TRIM39-201ENST00000376656 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
TRIM39-201ENST00000376656 DSCR9P59020 149 aa11.58□□□□□ -0.56
TRIM39-201ENST00000376656 ANKRD17O75179 2603 aaKnown RBP11.58□□□□□ -0.56
TRIM39-201ENST00000376656 IBA57-AS1B1ANH7 110 aa11.57□□□□□ -0.56
TRIM39-201ENST00000376656 FSHBP01225 129 aa11.57□□□□□ -0.56
TRIM39-201ENST00000376656 CFAP46Q8IYW2 2715 aa11.57□□□□□ -0.56
TRIM39-201ENST00000376656 SS18Q15532 418 aa11.57□□□□□ -0.56
TRIM39-201ENST00000376656 SERP2Q8N6R1 65 aa11.57□□□□□ -0.56
TRIM39-201ENST00000376656 C11orf68Q9H3H3 251 aaKnown RBP11.57□□□□□ -0.56
TRIM39-201ENST00000376656 DOPEY1Q5JWR5 2465 aa11.56□□□□□ -0.56
TRIM39-201ENST00000376656 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
TRIM39-201ENST00000376656 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
TRIM39-201ENST00000376656 TRGV2A0A075B6R0 118 aa11.55□□□□□ -0.56
TRIM39-201ENST00000376656 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
TRIM39-201ENST00000376656 TRBV6-4A0A1B0GX49 114 aa11.54□□□□□ -0.56
TRIM39-201ENST00000376656 PLA2G2AP14555 144 aa11.54□□□□□ -0.56
TRIM39-201ENST00000376656 FBN2P35556 2912 aa11.54□□□□□ -0.56
TRIM39-201ENST00000376656 A0A087WZ39 114 aa11.53□□□□□ -0.56
TRIM39-201ENST00000376656 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
TRIM39-201ENST00000376656 ORMDL1Q9P0S3 153 aa11.53□□□□□ -0.56
TRIM39-201ENST00000376656 NBPF19A0A087WUL8 3843 aa11.53□□□□□ -0.56
TRIM39-201ENST00000376656 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
TRIM39-201ENST00000376656 RPS28P62857 69 aaKnown RBP11.53□□□□□ -0.56
TRIM39-201ENST00000376656 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.56
TRIM39-201ENST00000376656 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
TRIM39-201ENST00000376656 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
TRIM39-201ENST00000376656 TRBV6-8A0A0A6YYG3 113 aa11.52□□□□□ -0.57
TRIM39-201ENST00000376656 CR1P17927 2039 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 TRGV4A0A0C4DH28 118 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 LY6G6DO95868 133 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 CCKP06307 115 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 HILS1P60008 231 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 DPH3Q96FX2 82 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 TLN2Q9Y4G6 2542 aa11.51□□□□□ -0.57
TRIM39-201ENST00000376656 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 TMEM258P61165 79 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 C6orf226Q5I0X4 101 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 CENPEQ02224 2701 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 WFDC10AQ9H1F0 79 aa11.5□□□□□ -0.57
TRIM39-201ENST00000376656 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
TRIM39-201ENST00000376656 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
TRIM39-201ENST00000376656 DSCR8Q96T75 97 aa11.49□□□□□ -0.57
TRIM39-201ENST00000376656 SETXQ7Z333 2677 aaKnown RBP11.48□□□□□ -0.57
TRIM39-201ENST00000376656 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
TRIM39-201ENST00000376656 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
TRIM39-201ENST00000376656 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms