RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TRGV4A0A0C4DH28 118 aa13.9□□□□□ -0.18
COL13A1-201ENST00000354547 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
COL13A1-201ENST00000354547 H7C423 109 aa13.9□□□□□ -0.18
COL13A1-201ENST00000354547 GAGE6Q13070 117 aa13.9□□□□□ -0.18
COL13A1-201ENST00000354547 PDZD2O15018 2839 aa13.89□□□□□ -0.19
COL13A1-201ENST00000354547 TOMM7Q9P0U1 55 aa13.89□□□□□ -0.19
COL13A1-201ENST00000354547 IGLV5-39A0A0G2JS06 123 aa13.89□□□□□ -0.19
COL13A1-201ENST00000354547 TMEM243Q9BU79 118 aa13.89□□□□□ -0.19
COL13A1-201ENST00000354547 FASNP49327 2511 aaKnown RBP13.88□□□□□ -0.19
COL13A1-201ENST00000354547 A0A1B0GV72 72 aa13.88□□□□□ -0.19
COL13A1-201ENST00000354547 SOSTDC1Q6X4U4 206 aa13.88□□□□□ -0.19
COL13A1-201ENST00000354547 IFITM1P13164 125 aa13.88□□□□□ -0.19
COL13A1-201ENST00000354547 PLAC8L1A1L4L8 177 aa13.87□□□□□ -0.19
COL13A1-201ENST00000354547 TIMM17BO60830 172 aa13.87□□□□□ -0.19
COL13A1-201ENST00000354547 UBE2WQ96B02 151 aa13.86□□□□□ -0.19
COL13A1-201ENST00000354547 DEFB130BP0DP73 79 aa13.85□□□□□ -0.19
COL13A1-201ENST00000354547 DEFB130AP0DP74 79 aa13.85□□□□□ -0.19
COL13A1-201ENST00000354547 TMEM262E9PQX1 116 aa13.85□□□□□ -0.19
COL13A1-201ENST00000354547 C16orf74Q96GX8 76 aa13.85□□□□□ -0.19
COL13A1-201ENST00000354547 F5H768 121 aa13.84□□□□□ -0.19
COL13A1-201ENST00000354547 CHCHD5Q9BSY4 110 aa13.83□□□□□ -0.19
COL13A1-201ENST00000354547 LST1O00453 97 aa13.83□□□□□ -0.2
COL13A1-201ENST00000354547 TEX29Q8N6K0 151 aa13.83□□□□□ -0.2
COL13A1-201ENST00000354547 CSDC2Q9Y534 153 aaKnown RBP13.83□□□□□ -0.2
COL13A1-201ENST00000354547 VWFP04275 2813 aa13.83□□□□□ -0.2
COL13A1-201ENST00000354547 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 IGLV1-51P01701 117 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 KRTAP1-1Q07627 177 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 UNC79Q9P2D8 2635 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 IGLV4-60A0A075B6I1 120 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 CRLF1O75462 422 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 C19orf73Q9NVV2 129 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 SMR3AQ99954 134 aa13.82□□□□□ -0.2
COL13A1-201ENST00000354547 ANK3Q12955 4377 aaKnown RBP13.81□□□□□ -0.2
COL13A1-201ENST00000354547 M0QXV9 152 aa13.8□□□□□ -0.2
COL13A1-201ENST00000354547 HECTD1Q9ULT8 2610 aa13.79□□□□□ -0.2
COL13A1-201ENST00000354547 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
COL13A1-201ENST00000354547 CSNK1G2-AS1Q8NCQ2 148 aa13.79□□□□□ -0.2
COL13A1-201ENST00000354547 C11orf68Q9H3H3 251 aaKnown RBP13.79□□□□□ -0.2
COL13A1-201ENST00000354547 RNF183Q96D59 192 aa13.79□□□□□ -0.2
COL13A1-201ENST00000354547 SNCGO76070 127 aa13.78□□□□□ -0.2
COL13A1-201ENST00000354547 A0A096LPF7 62 aa13.78□□□□□ -0.2
COL13A1-201ENST00000354547 C5orf38Q86SI9 138 aa13.78□□□□□ -0.2
COL13A1-201ENST00000354547 TRBV6-4A0A1B0GX49 114 aa13.77□□□□□ -0.2
COL13A1-201ENST00000354547 FHL2Q14192 279 aa13.77□□□□□ -0.2
COL13A1-201ENST00000354547 H3BT86 120 aa13.76□□□□□ -0.21
COL13A1-201ENST00000354547 CMC4P56277 68 aaPredicted RBP13.76□□□□□ -0.21
COL13A1-201ENST00000354547 CFAP161Q6P656 301 aa13.76□□□□□ -0.21
COL13A1-201ENST00000354547 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
COL13A1-201ENST00000354547 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
COL13A1-201ENST00000354547 COX7B2Q8TF08 81 aa13.76□□□□□ -0.21
COL13A1-201ENST00000354547 LINC00158P58513 81 aa13.75□□□□□ -0.21
COL13A1-201ENST00000354547 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
COL13A1-201ENST00000354547 TRBV6-8A0A0A6YYG3 113 aa13.75□□□□□ -0.21
COL13A1-201ENST00000354547 CLPSL2Q6UWE3 100 aa13.75□□□□□ -0.21
COL13A1-201ENST00000354547 C15orf53Q8NAA6 179 aa13.75□□□□□ -0.21
COL13A1-201ENST00000354547 PFN2P35080 140 aa13.74□□□□□ -0.21
COL13A1-201ENST00000354547 C16orf95Q9H693 158 aa13.74□□□□□ -0.21
COL13A1-201ENST00000354547 PF4P02776 101 aa13.74□□□□□ -0.21
COL13A1-201ENST00000354547 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 COX7A2LO14548 114 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 HERV-K104P63124 156 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 GAGE2BQ13066 116 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 GAGE2EQ4V326 116 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 OVOL2Q9BRP0 275 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 GAGE2DQ9UEU5 116 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 ANAPC13Q9BS18 74 aa13.73□□□□□ -0.21
COL13A1-201ENST00000354547 COPS9Q8WXC6 57 aa13.72□□□□□ -0.21
COL13A1-201ENST00000354547 CITED1Q99966 193 aa13.71□□□□□ -0.21
COL13A1-201ENST00000354547 DEFB4AO15263 64 aa13.71□□□□□ -0.22
COL13A1-201ENST00000354547 FAM218AQ96MZ4 157 aa13.71□□□□□ -0.22
COL13A1-201ENST00000354547 GYPEP15421 78 aa13.7□□□□□ -0.22
COL13A1-201ENST00000354547 SHISA2Q6UWI4 295 aa13.7□□□□□ -0.22
COL13A1-201ENST00000354547 KRTAP10-3P60369 221 aa13.7□□□□□ -0.22
COL13A1-201ENST00000354547 Q9HAA7 133 aa13.7□□□□□ -0.22
COL13A1-201ENST00000354547 XCL1P47992 114 aa13.69□□□□□ -0.22
COL13A1-201ENST00000354547 SND1-IT1Q9HBX3 110 aa13.69□□□□□ -0.22
COL13A1-201ENST00000354547 LINC00482Q8N8I6 264 aa13.69□□□□□ -0.22
COL13A1-201ENST00000354547 HILS1P60008 231 aa13.68□□□□□ -0.22
COL13A1-201ENST00000354547 LINC00337Q8N6G1 96 aa13.68□□□□□ -0.22
COL13A1-201ENST00000354547 CRPP02741 224 aa13.68□□□□□ -0.22
COL13A1-201ENST00000354547 LINC01600Q96MT4 127 aa13.68□□□□□ -0.22
COL13A1-201ENST00000354547 IGHV3OR16-9A0A0B4J2B5 98 aa13.67□□□□□ -0.22
COL13A1-201ENST00000354547 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
COL13A1-201ENST00000354547 TENM1Q9UKZ4 2725 aa13.67□□□□□ -0.22
COL13A1-201ENST00000354547 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
COL13A1-201ENST00000354547 BAALC-AS2P0C853 105 aa13.66□□□□□ -0.22
COL13A1-201ENST00000354547 IGKV2-28A0A075B6P5 120 aa13.65□□□□□ -0.22
COL13A1-201ENST00000354547 IGKV2D-28P01615 120 aa13.65□□□□□ -0.22
COL13A1-201ENST00000354547 C6orf226Q5I0X4 101 aa13.65□□□□□ -0.22
COL13A1-201ENST00000354547 LINC00959A0A1B0GUT2 108 aa13.64□□□□□ -0.23
COL13A1-201ENST00000354547 CCL18P55774 89 aa13.64□□□□□ -0.23
COL13A1-201ENST00000354547 OR13C6PQ8NH95 151 aa13.64□□□□□ -0.23
COL13A1-201ENST00000354547 ATRQ13535 2644 aa13.63□□□□□ -0.23
COL13A1-201ENST00000354547 PAX4O43316 350 aa13.63□□□□□ -0.23
COL13A1-201ENST00000354547 TRAV13-2A0A0B4J235 113 aa13.62□□□□□ -0.23
COL13A1-201ENST00000354547 OTOGQ6ZRI0 2925 aa13.62□□□□□ -0.23
COL13A1-201ENST00000354547 A0A087WZ39 114 aa13.61□□□□□ -0.23
COL13A1-201ENST00000354547 ATP5G1P05496 136 aa13.61□□□□□ -0.23
COL13A1-201ENST00000354547 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms