RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PF4V1P10720 104 aa5.47□□□□□ -1.53
C11orf54-202ENST00000354421 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
C11orf54-202ENST00000354421 VSIG2Q96IQ7 327 aa5.47□□□□□ -1.53
C11orf54-202ENST00000354421 SPXQ9BT56 116 aa5.47□□□□□ -1.53
C11orf54-202ENST00000354421 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
C11orf54-202ENST00000354421 A0A1W2PPR1 153 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 K7EQG2 157 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 PF4P02776 101 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 PRSS2P07478 247 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 CFHR3Q02985 330 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 LRRC75A-AS1Q8N1F1 130 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 BPESC1Q9GZL8 116 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.54
C11orf54-202ENST00000354421 TRAV8-3A0A0A6YYJ7 113 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 CLEC2BQ92478 149 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 TMEM101Q96IK0 257 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 NDUFA1O15239 70 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 EDN2P20800 178 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 TIRAPP58753 221 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 SNRPD3P62318 126 aaKnown RBP5.45□□□□□ -1.54
C11orf54-202ENST00000354421 MEIG1Q5JSS6 88 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 DUX3Q96PT4 197 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 LINC01587Q99440 93 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 CHCHD7Q9BUK0 85 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
C11orf54-202ENST00000354421 HRNRQ86YZ3 2850 aaPredicted RBP5.44□□□□□ -1.54
C11orf54-202ENST00000354421 HERC1Q15751 4861 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 TRAV12-2A0A075B6T6 113 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 IGHV3OR16-10A0A075B7F0 116 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 IGLV5-45A0A087WSX0 123 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 UBTD1Q9HAC8 227 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
C11orf54-202ENST00000354421 HERV-K104P63124 156 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 TMEM95Q3KNT9 176 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 Q6ZSV7 163 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 CITED2Q99967 270 aaPredicted RBP5.43□□□□□ -1.54
C11orf54-202ENST00000354421 TNFRSF18Q9Y5U5 241 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 TMEM89A2RUT3 159 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 A8MTW9 85 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 CXCL5P42830 114 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 LY6EQ16553 131 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 SPINK13Q1W4C9 94 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 BRD3OSQ6XYD6 125 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 SDIM1Q6ZPB5 146 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 DNAJC30Q96LL9 226 aa5.43□□□□□ -1.54
C11orf54-202ENST00000354421 H3BUX3 64 aa5.42□□□□□ -1.54
C11orf54-202ENST00000354421 COX7A2LO14548 114 aa5.42□□□□□ -1.54
C11orf54-202ENST00000354421 IGKV3-20P01619 116 aa5.42□□□□□ -1.54
C11orf54-202ENST00000354421 BLCAPP62952 87 aa5.42□□□□□ -1.54
C11orf54-202ENST00000354421 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
C11orf54-202ENST00000354421 CEMP1Q6PRD7 247 aaPredicted RBP5.42□□□□□ -1.54
C11orf54-202ENST00000354421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.42□□□□□ -1.54
C11orf54-202ENST00000354421 CHCHD5Q9BSY4 110 aa5.42□□□□□ -1.54
C11orf54-202ENST00000354421 WNK2Q9Y3S1 2297 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 IGLV5-39A0A0G2JS06 123 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 A8MZ25 164 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 TRACP01848 142 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 PSMB8P28062 276 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
C11orf54-202ENST00000354421 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 PIMREGQ9BSJ6 248 aa5.41□□□□□ -1.54
C11orf54-202ENST00000354421 RBMY1A1P0DJD3 496 aaKnown RBP5.4□□□□□ -1.54
C11orf54-202ENST00000354421 RBMY1CP0DJD4 496 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 IGHV4-38-2P0DP08 117 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 PROK1P58294 105 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 NPC2P61916 151 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 RBMY1FQ15415 496 aaKnown RBP5.4□□□□□ -1.54
C11orf54-202ENST00000354421 FAM222AQ5U5X8 452 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 DAND5Q8N907 189 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 OVOL2Q9BRP0 275 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 PEMTQ9UBM1 199 aa5.4□□□□□ -1.54
C11orf54-202ENST00000354421 UQCRQO14949 82 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 ZNF415Q09FC8 603 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 BEAN1Q3B7T3 259 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 Q6ZSN1 163 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 C5orf38Q86SI9 138 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 C3orf22Q8N5N4 141 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 LINC00467Q9BRT7 94 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.55
C11orf54-202ENST00000354421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-202ENST00000354421 IGHV3-73A0A0B4J1V6 119 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 IGKV2-29A2NJV5 120 aaPredicted RBP5.39□□□□□ -1.55
C11orf54-202ENST00000354421 IGHV3-53P01767 116 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 SMCR5Q8TEV8 140 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 DUX5Q96PT3 197 aa5.39□□□□□ -1.55
C11orf54-202ENST00000354421 IGHV4-61A0A0C4DH41 118 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 A0A1B0GX51 115 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 RS1O15537 224 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 HERVK_113P63121 156 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 SOSTDC1Q6X4U4 206 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 C22orf24Q9Y442 160 aa5.38□□□□□ -1.55
C11orf54-202ENST00000354421 BAALC-AS2P0C853 105 aa5.37□□□□□ -1.55
C11orf54-202ENST00000354421 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms