RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 Q6ZTI0 123 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 SPTAN1Q13813 2472 aaKnown RBP9.42□□□□□ -0.9
IFT88-202ENST00000351808 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 SIRPDQ9H106 197 aa9.42□□□□□ -0.9
IFT88-202ENST00000351808 ACACAQ13085 2346 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 LINC00158P58513 81 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 ZNF292O60281 2723 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 CCL18P55774 89 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 BLCAPP62952 87 aa9.41□□□□□ -0.9
IFT88-202ENST00000351808 NBL1P41271 181 aa9.4□□□□□ -0.91
IFT88-202ENST00000351808 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.91
IFT88-202ENST00000351808 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
IFT88-202ENST00000351808 RNASE1P07998 156 aaKnown RBP9.39□□□□□ -0.91
IFT88-202ENST00000351808 PAX4O43316 350 aa9.38□□□□□ -0.91
IFT88-202ENST00000351808 CEP295Q9C0D2 2601 aa9.38□□□□□ -0.91
IFT88-202ENST00000351808 FAM229BQ4G0N7 80 aa9.38□□□□□ -0.91
IFT88-202ENST00000351808 IGFL3Q6UXB1 125 aa9.38□□□□□ -0.91
IFT88-202ENST00000351808 SNRPD3P62318 126 aaKnown RBP9.37□□□□□ -0.91
IFT88-202ENST00000351808 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
IFT88-202ENST00000351808 BCE1O60756 84 aa9.36□□□□□ -0.91
IFT88-202ENST00000351808 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
IFT88-202ENST00000351808 MOB4Q9Y3A3 225 aa9.36□□□□□ -0.91
IFT88-202ENST00000351808 HAMPP81172 84 aa9.36□□□□□ -0.91
IFT88-202ENST00000351808 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
IFT88-202ENST00000351808 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
IFT88-202ENST00000351808 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
IFT88-202ENST00000351808 ANKRD11Q6UB99 2663 aaPredicted RBP9.35□□□□□ -0.91
IFT88-202ENST00000351808 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
IFT88-202ENST00000351808 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.92
IFT88-202ENST00000351808 CELSR1Q9NYQ6 3014 aa9.33□□□□□ -0.92
IFT88-202ENST00000351808 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
IFT88-202ENST00000351808 TMEM256-PLSCR3K7ERE1 68 aa9.33□□□□□ -0.92
IFT88-202ENST00000351808 GRNP28799 593 aaKnown RBP9.33□□□□□ -0.92
IFT88-202ENST00000351808 K7EQG2 157 aa9.33□□□□□ -0.92
IFT88-202ENST00000351808 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
IFT88-202ENST00000351808 M0R2N4 97 aa9.32□□□□□ -0.92
IFT88-202ENST00000351808 CFHR3Q02985 330 aa9.32□□□□□ -0.92
IFT88-202ENST00000351808 LY6EQ16553 131 aa9.32□□□□□ -0.92
IFT88-202ENST00000351808 Q8N814 137 aa9.32□□□□□ -0.92
IFT88-202ENST00000351808 NBASA2RRP1 2371 aa9.32□□□□□ -0.92
IFT88-202ENST00000351808 K7EMT4 169 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 NDUFC1O43677 76 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 MIFP14174 115 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 PLA2G2CQ5R387 149 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
IFT88-202ENST00000351808 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
IFT88-202ENST00000351808 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
IFT88-202ENST00000351808 Q8N3U1 123 aa9.3□□□□□ -0.92
IFT88-202ENST00000351808 A0A096LNT2 108 aa9.29□□□□□ -0.92
IFT88-202ENST00000351808 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
IFT88-202ENST00000351808 HRNRQ86YZ3 2850 aaPredicted RBP9.29□□□□□ -0.92
IFT88-202ENST00000351808 TRBV7-4A0A0J9YYF1 115 aa9.29□□□□□ -0.92
IFT88-202ENST00000351808 Q6ZVQ6 151 aa9.29□□□□□ -0.92
IFT88-202ENST00000351808 DEFB124Q8NES8 71 aa9.29□□□□□ -0.92
IFT88-202ENST00000351808 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
IFT88-202ENST00000351808 LY6G6DO95868 133 aa9.28□□□□□ -0.92
IFT88-202ENST00000351808 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
IFT88-202ENST00000351808 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
IFT88-202ENST00000351808 Q6ZQT0 140 aa9.28□□□□□ -0.92
IFT88-202ENST00000351808 Q8NA96 180 aa9.28□□□□□ -0.92
IFT88-202ENST00000351808 IBA57-AS1B1ANH7 110 aa9.27□□□□□ -0.93
IFT88-202ENST00000351808 K7EQD1 137 aa9.27□□□□□ -0.93
IFT88-202ENST00000351808 PMAIP1Q13794 54 aa9.27□□□□□ -0.93
IFT88-202ENST00000351808 H3BUA1 57 aa9.26□□□□□ -0.93
IFT88-202ENST00000351808 PRB1P04280 392 aa9.26□□□□□ -0.93
IFT88-202ENST00000351808 SCXQ7RTU7 201 aa9.26□□□□□ -0.93
IFT88-202ENST00000351808 COL12A1Q99715 3063 aa9.26□□□□□ -0.93
IFT88-202ENST00000351808 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
IFT88-202ENST00000351808 A0A087WZ39 114 aa9.25□□□□□ -0.93
IFT88-202ENST00000351808 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
IFT88-202ENST00000351808 ZNF843Q8N446 348 aa9.25□□□□□ -0.93
IFT88-202ENST00000351808 A0A1W2PRX2 142 aa9.24□□□□□ -0.93
IFT88-202ENST00000351808 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
IFT88-202ENST00000351808 NREPQ16612 68 aa9.24□□□□□ -0.93
IFT88-202ENST00000351808 C19orf84I3L1E1 186 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 IGLV1-40P01703 118 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 ESRGQ1W209 222 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 LAMTOR3Q9UHA4 124 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 UBE2L6O14933 153 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 DEFB131AP59861 70 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 C11orf71Q6IPW1 123 aa9.23□□□□□ -0.93
IFT88-202ENST00000351808 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
IFT88-202ENST00000351808 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.93
IFT88-202ENST00000351808 CXCL6P80162 114 aa9.21□□□□□ -0.94
IFT88-202ENST00000351808 C10orf99Q6UWK7 81 aa9.21□□□□□ -0.94
IFT88-202ENST00000351808 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
IFT88-202ENST00000351808 H3BUX3 64 aa9.2□□□□□ -0.94
IFT88-202ENST00000351808 LOC110117498A0A087WWA1 95 aa9.2□□□□□ -0.94
IFT88-202ENST00000351808 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
IFT88-202ENST00000351808 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
IFT88-202ENST00000351808 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
IFT88-202ENST00000351808 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
IFT88-202ENST00000351808 BBC3Q96PG8 261 aaPredicted RBP9.19□□□□□ -0.94
IFT88-202ENST00000351808 TRGV1A0A0A0MS02 117 aa9.18□□□□□ -0.94
IFT88-202ENST00000351808 LRCOL1A6NCL2 159 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 671.6 ms