RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 H3BRM9 83 aa14.86□□□□□ -0.03
TOP1MT-201ENST00000329245 LGALS3P17931 250 aaKnown RBP14.86□□□□□ -0.03
TOP1MT-201ENST00000329245 TRAV8-3A0A0A6YYJ7 113 aa14.85□□□□□ -0.03
TOP1MT-201ENST00000329245 IGLL5B9A064 214 aa14.85□□□□□ -0.03
TOP1MT-201ENST00000329245 CLPSL2Q6UWE3 100 aa14.85□□□□□ -0.03
TOP1MT-201ENST00000329245 LINC00269Q8N2A0 174 aa14.85□□□□□ -0.03
TOP1MT-201ENST00000329245 COL7A1Q02388 2944 aa14.85□□□□□ -0.03
TOP1MT-201ENST00000329245 LINC00959A0A1B0GUT2 108 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 SPINK8P0C7L1 97 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 IGHV3-30-3P0DP02 117 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 PLEKHB2Q96CS7 222 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 IGHV1-58A0A0C4DH39 117 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 SCGB1D4Q6XE38 83 aa14.84□□□□□ -0.03
TOP1MT-201ENST00000329245 SS18Q15532 418 aa14.82□□□□□ -0.04
TOP1MT-201ENST00000329245 WFDC10BQ8IUB3 73 aa14.82□□□□□ -0.04
TOP1MT-201ENST00000329245 IGHV3-30P01768 117 aa14.81□□□□□ -0.04
TOP1MT-201ENST00000329245 IGHV3-33P01772 117 aa14.81□□□□□ -0.04
TOP1MT-201ENST00000329245 IGHV3-30-5P0DP03 117 aa14.81□□□□□ -0.04
TOP1MT-201ENST00000329245 REG3AQ06141 175 aa14.81□□□□□ -0.04
TOP1MT-201ENST00000329245 ORAOV1Q8WV07 137 aa14.81□□□□□ -0.04
TOP1MT-201ENST00000329245 GCSHP23434 173 aa14.79□□□□□ -0.04
TOP1MT-201ENST00000329245 KLK12Q9UKR0 248 aa14.79□□□□□ -0.04
TOP1MT-201ENST00000329245 MEGF8Q7Z7M0 2845 aa14.79□□□□□ -0.04
TOP1MT-201ENST00000329245 HIST1H4GQ99525 98 aa14.78□□□□□ -0.04
TOP1MT-201ENST00000329245 CCL25O15444 150 aa14.78□□□□□ -0.04
TOP1MT-201ENST00000329245 XCL1P47992 114 aa14.78□□□□□ -0.04
TOP1MT-201ENST00000329245 STAB2Q8WWQ8 2551 aa14.77□□□□□ -0.04
TOP1MT-201ENST00000329245 TAL2Q16559 108 aa14.77□□□□□ -0.04
TOP1MT-201ENST00000329245 CEND1Q8N111 149 aa14.77□□□□□ -0.04
TOP1MT-201ENST00000329245 FXYD2P54710 66 aa14.76□□□□□ -0.05
TOP1MT-201ENST00000329245 IGHV3OR16-9A0A0B4J2B5 98 aa14.76□□□□□ -0.05
TOP1MT-201ENST00000329245 SMIM1B2RUZ4 78 aa14.76□□□□□ -0.05
TOP1MT-201ENST00000329245 CCL18P55774 89 aa14.76□□□□□ -0.05
TOP1MT-201ENST00000329245 IGLV5-39A0A0G2JS06 123 aa14.75□□□□□ -0.05
TOP1MT-201ENST00000329245 TM2D2Q9BX73 214 aa14.75□□□□□ -0.05
TOP1MT-201ENST00000329245 IGLV10-54A0A075B6I4 117 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 K7EP13 123 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 C10orf126Q8N4M7 172 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 A6NDN8 102 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 C5orf38Q86SI9 138 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 NDUFA12Q9UI09 145 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 LINC00588Q9Y4M8 146 aa14.74□□□□□ -0.05
TOP1MT-201ENST00000329245 CHCHD10Q8WYQ3 142 aaPredicted RBP14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 PRR34Q9NV39 138 aa14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 PRKDCP78527 4128 aaKnown RBP14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 CRPP02741 224 aa14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 ZFAND6Q6FIF0 208 aa14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 Q6ZVH6 145 aa14.73□□□□□ -0.05
TOP1MT-201ENST00000329245 PTTG1IPP53801 180 aa14.72□□□□□ -0.05
TOP1MT-201ENST00000329245 SRSF9Q13242 221 aaKnown RBP eCLIP14.72□□□□□ -0.05
TOP1MT-201ENST00000329245 A0A087WZ39 114 aa14.71□□□□□ -0.05
TOP1MT-201ENST00000329245 TAX1BP3O14907 124 aa14.71□□□□□ -0.05
TOP1MT-201ENST00000329245 ENHOQ6UWT2 76 aa14.71□□□□□ -0.05
TOP1MT-201ENST00000329245 UBE2WQ96B02 151 aa14.71□□□□□ -0.05
TOP1MT-201ENST00000329245 A0A0J9YXY3 114 aa14.71□□□□□ -0.06
TOP1MT-201ENST00000329245 LINC01556Q5JQF7 62 aa14.71□□□□□ -0.06
TOP1MT-201ENST00000329245 CD164L2Q6UWJ8 174 aa14.71□□□□□ -0.06
TOP1MT-201ENST00000329245 SPANXB1Q9NS25 103 aaPredicted RBP14.71□□□□□ -0.06
TOP1MT-201ENST00000329245 COX11Q9Y6N1 276 aa14.68□□□□□ -0.06
TOP1MT-201ENST00000329245 TOMM7Q9P0U1 55 aa14.67□□□□□ -0.06
TOP1MT-201ENST00000329245 NDUFA1O15239 70 aa14.67□□□□□ -0.06
TOP1MT-201ENST00000329245 NHP2Q9NX24 153 aaKnown RBP14.67□□□□□ -0.06
TOP1MT-201ENST00000329245 NUPR2A6NF83 97 aa14.66□□□□□ -0.06
TOP1MT-201ENST00000329245 DNAH10OSP0CZ25 163 aa14.66□□□□□ -0.06
TOP1MT-201ENST00000329245 TRAV8-4A0A0B4J246 113 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 COX7A2LO14548 114 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 COX7B2Q8TF08 81 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 APLNQ9ULZ1 77 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 GAGE12HA6NDE8 117 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 TMEM238C9JI98 176 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 MIAQ16674 131 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 Q9H8V8 135 aa14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 KLK5Q9Y337 293 aaPredicted RBP14.65□□□□□ -0.06
TOP1MT-201ENST00000329245 MALP21145 153 aa14.64□□□□□ -0.07
TOP1MT-201ENST00000329245 K7ERJ3 54 aa14.64□□□□□ -0.07
TOP1MT-201ENST00000329245 FOXI1Q12951 378 aa14.64□□□□□ -0.07
TOP1MT-201ENST00000329245 LITAFQ99732 161 aa14.64□□□□□ -0.07
TOP1MT-201ENST00000329245 SMIM13P0DJ93 91 aa14.63□□□□□ -0.07
TOP1MT-201ENST00000329245 RAB37Q96AX2 223 aa14.63□□□□□ -0.07
TOP1MT-201ENST00000329245 LINC01561Q8N1V8 128 aa14.62□□□□□ -0.07
TOP1MT-201ENST00000329245 UPK3BQ9BT76 320 aa14.62□□□□□ -0.07
TOP1MT-201ENST00000329245 ZNF625Q96I27 306 aaPredicted RBP14.62□□□□□ -0.07
TOP1MT-201ENST00000329245 TMEM238LA0A1B0GVL6 79 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 A6NJY4 79 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 PRSS2P07478 247 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 C6orf226Q5I0X4 101 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 ADAMTSL4-AS1Q5T5F5 129 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 UBE2DNLQ8IWF7 75 aa14.6□□□□□ -0.07
TOP1MT-201ENST00000329245 A0A1B0GWB2 263 aa14.58□□□□□ -0.08
TOP1MT-201ENST00000329245 C9orf118A6NHY6 69 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 TIMM17BO60830 172 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 MUSTN1Q8IVN3 82 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 C1orf43Q9BWL3 253 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 SPANXDQ9BXN6 97 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 SPANXCQ9NY87 97 aa14.57□□□□□ -0.08
TOP1MT-201ENST00000329245 APOMO95445 188 aa14.56□□□□□ -0.08
TOP1MT-201ENST00000329245 HERV-K104P63124 156 aa14.56□□□□□ -0.08
TOP1MT-201ENST00000329245 CIRBPQ14011 172 aaKnown RBP14.56□□□□□ -0.08
TOP1MT-201ENST00000329245 Q8IZM0 81 aa14.56□□□□□ -0.08
TOP1MT-201ENST00000329245 NAA38Q9BRA0 125 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms