RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 APRG1Q8IVJ8 170 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 K7EMT4 169 aa12.13□□□□□ -0.47
PACS1-201ENST00000320580 SIRPDQ9H106 197 aa12.13□□□□□ -0.47
PACS1-201ENST00000320580 PCSK5Q92824 1860 aa12.12□□□□□ -0.47
PACS1-201ENST00000320580 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
PACS1-201ENST00000320580 K7EQD1 137 aa12.12□□□□□ -0.47
PACS1-201ENST00000320580 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
PACS1-201ENST00000320580 CCKP06307 115 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 COX6A2Q02221 97 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 CCL19Q99731 98 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 FRYQ5TBA9 3013 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
PACS1-201ENST00000320580 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
PACS1-201ENST00000320580 POLQO75417 2590 aa12.1□□□□□ -0.47
PACS1-201ENST00000320580 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
PACS1-201ENST00000320580 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
PACS1-201ENST00000320580 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
PACS1-201ENST00000320580 SEC61GP60059 68 aa12.09□□□□□ -0.47
PACS1-201ENST00000320580 DMDP11532 3685 aa12.09□□□□□ -0.47
PACS1-201ENST00000320580 PRORYQ9H606 182 aa12.09□□□□□ -0.47
PACS1-201ENST00000320580 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.48
PACS1-201ENST00000320580 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
PACS1-201ENST00000320580 CCL18P55774 89 aa12.08□□□□□ -0.48
PACS1-201ENST00000320580 RMI2Q96E14 147 aa12.08□□□□□ -0.48
PACS1-201ENST00000320580 LITAFQ99732 161 aa12.08□□□□□ -0.48
PACS1-201ENST00000320580 A0A096LPF7 62 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 HTN3P15516 51 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 DMXL2Q8TDJ6 3036 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 K7EQG2 157 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 NDUFC1O43677 76 aa12.07□□□□□ -0.48
PACS1-201ENST00000320580 IGHV4-38-2P0DP08 117 aa12.06□□□□□ -0.48
PACS1-201ENST00000320580 SONP18583 2426 aaKnown RBP12.06□□□□□ -0.48
PACS1-201ENST00000320580 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
PACS1-201ENST00000320580 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
PACS1-201ENST00000320580 FHL2Q14192 279 aa12.06□□□□□ -0.48
PACS1-201ENST00000320580 NREPQ16612 68 aa12.06□□□□□ -0.48
PACS1-201ENST00000320580 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
PACS1-201ENST00000320580 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
PACS1-201ENST00000320580 EDN2P20800 178 aa12.05□□□□□ -0.48
PACS1-201ENST00000320580 CENPEQ02224 2701 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 C6orf99Q4VX62 202 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 IGLV10-54A0A075B6I4 117 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 MIFP14174 115 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 LINC00337Q8N6G1 96 aa12.04□□□□□ -0.48
PACS1-201ENST00000320580 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
PACS1-201ENST00000320580 SLURP1P55000 103 aa12.03□□□□□ -0.48
PACS1-201ENST00000320580 ATP5EP56381 51 aaPredicted RBP12.03□□□□□ -0.48
PACS1-201ENST00000320580 LINC00336Q6ZUF6 198 aa12.01□□□□□ -0.49
PACS1-201ENST00000320580 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
PACS1-201ENST00000320580 CDSNQ15517 529 aa12.01□□□□□ -0.49
PACS1-201ENST00000320580 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
PACS1-201ENST00000320580 PDE6GP18545 87 aa12.01□□□□□ -0.49
PACS1-201ENST00000320580 IGHV4-59P01825 116 aa12□□□□□ -0.49
PACS1-201ENST00000320580 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
PACS1-201ENST00000320580 TRBV10-1A0A0K0K1A3 114 aa12□□□□□ -0.49
PACS1-201ENST00000320580 LRCOL1A6NCL2 159 aa12□□□□□ -0.49
PACS1-201ENST00000320580 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
PACS1-201ENST00000320580 WIPF1O43516 503 aa12□□□□□ -0.49
PACS1-201ENST00000320580 Q6ZTI0 123 aa12□□□□□ -0.49
PACS1-201ENST00000320580 ZNF575Q86XF7 245 aa12□□□□□ -0.49
PACS1-201ENST00000320580 MSMBP08118 114 aa11.99□□□□□ -0.49
PACS1-201ENST00000320580 B4DSR2 109 aa11.98□□□□□ -0.49
PACS1-201ENST00000320580 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
PACS1-201ENST00000320580 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
PACS1-201ENST00000320580 DEFB105AQ8NG35 78 aa11.98□□□□□ -0.49
PACS1-201ENST00000320580 SETD2Q9BYW2 2564 aaPredicted RBP11.97□□□□□ -0.49
PACS1-201ENST00000320580 Q6ZSN1 163 aa11.97□□□□□ -0.49
PACS1-201ENST00000320580 Q8N3U1 123 aa11.97□□□□□ -0.49
PACS1-201ENST00000320580 SPTSSBQ8NFR3 76 aa11.97□□□□□ -0.49
PACS1-201ENST00000320580 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
PACS1-201ENST00000320580 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.5
PACS1-201ENST00000320580 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.5
PACS1-201ENST00000320580 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
PACS1-201ENST00000320580 Q6ZQY7 126 aa11.95□□□□□ -0.5
PACS1-201ENST00000320580 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
PACS1-201ENST00000320580 Q9UF83 564 aa11.94□□□□□ -0.5
PACS1-201ENST00000320580 C19orf84I3L1E1 186 aa11.94□□□□□ -0.5
PACS1-201ENST00000320580 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
PACS1-201ENST00000320580 MUC4Q99102 2169 aa11.94□□□□□ -0.5
PACS1-201ENST00000320580 Q8N814 137 aa11.94□□□□□ -0.5
PACS1-201ENST00000320580 IGHV4-61A0A0C4DH41 118 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 BPY2O14599 106 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 C10orf99Q6UWK7 81 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 DEFB112Q30KQ8 113 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 PRR4Q16378 134 aa11.93□□□□□ -0.5
PACS1-201ENST00000320580 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
PACS1-201ENST00000320580 LMO4P61968 165 aa11.92□□□□□ -0.5
PACS1-201ENST00000320580 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
PACS1-201ENST00000320580 DIRC1Q969H9 104 aa11.92□□□□□ -0.5
PACS1-201ENST00000320580 A6NDX4 124 aa11.91□□□□□ -0.5
PACS1-201ENST00000320580 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms