RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 EIF4EBP1Q13541 118 aaPredicted RBP2.74□□□□□ -1.97
GEN1-201ENST00000317402 LINC01561Q8N1V8 128 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 SHANK2-AS3Q9BTD1 123 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 NXPH4O95158 308 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 C16orf74Q96GX8 76 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 GAFA1Q96PS6 74 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 G3V318 75 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 COX7A2LO14548 114 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 UBE2D4Q9Y2X8 147 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TRBV7-3A0A075B6L6 115 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TRBV10-3A0A0K0K1G6 114 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 NFE4Q86UQ8 179 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 IGF2BP2-AS1Q96M15 143 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 IGHV1-3A0A0C4DH29 117 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TRBV6-1A0A0K0K1D8 114 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 LOXP28300 417 aaPredicted RBP2.74□□□□□ -1.97
GEN1-201ENST00000317402 PROK1P58294 105 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 MDFIQ99750 246 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 COL7A1Q02388 2944 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 SAA4P35542 130 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TMEM61Q8N0U2 210 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 SPATA3Q8NHX4 192 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TOMM6Q96B49 74 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 ODF3Q96PU9 254 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 PKD1L1Q8TDX9 2849 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 IGKV1D-37A0A075B6S9 117 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 LRCOL1A6NCL2 159 aa2.74□□□□□ -1.97
GEN1-201ENST00000317402 TRBV27A0A0K0K1C4 114 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 BRI3O95415 125 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 PIP4P1Q86T03 277 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 C14orf178Q8N769 122 aaPredicted RBP2.73□□□□□ -1.97
GEN1-201ENST00000317402 MED14OSP0DP75 135 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 ZNF833PQ6ZTB9 187 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 PLAC8L1A1L4L8 177 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 P0DMU3 169 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 FAM231AP0DMU4 169 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 FAM231CP0DMU5 169 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 ZFP36P26651 326 aaKnown RBP2.73□□□□□ -1.97
GEN1-201ENST00000317402 BPESC1Q9GZL8 116 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 NDUFA4L2Q9NRX3 87 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 C11orf21Q9P2W6 132 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 LINC00474Q9P2X8 69 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 HRNRQ86YZ3 2850 aaPredicted RBP2.73□□□□□ -1.97
GEN1-201ENST00000317402 VWFP04275 2813 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 MSMBP08118 114 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 C5orf38Q86SI9 138 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 TRBV10-1A0A0K0K1A3 114 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 IGLV1-44P01699 117 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 MYCNOSP40205 109 aa2.73□□□□□ -1.97
GEN1-201ENST00000317402 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 A0A0J9YXY3 114 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 MIFP14174 115 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 PRR9Q5T870 116 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 C9orf66Q5T8R8 295 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 P0C879 139 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 FBXL19-AS1Q494R0 122 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 Q6JHZ5 121 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 A0A087WWL8 130 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 TENM2Q9NT68 2774 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 PIK3CD-AS1Q5SR53 167 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 CEMP1Q6PRD7 247 aaPredicted RBP2.72□□□□□ -1.97
GEN1-201ENST00000317402 ZNF706Q9Y5V0 76 aaPredicted RBP2.72□□□□□ -1.97
GEN1-201ENST00000317402 BBC3Q96PG8 261 aaPredicted RBP2.72□□□□□ -1.97
GEN1-201ENST00000317402 ADORA2A-AS1P86434 159 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 HIGD2AQ9BW72 106 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 IGLV3-9A0A075B6K5 115 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 IGLV5-45A0A087WSX0 123 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 Q9HAA7 133 aa2.72□□□□□ -1.97
GEN1-201ENST00000317402 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.97
GEN1-201ENST00000317402 CCL18P55774 89 aa2.71□□□□□ -1.97
GEN1-201ENST00000317402 LINC00336Q6ZUF6 198 aa2.71□□□□□ -1.97
GEN1-201ENST00000317402 HHLA3Q9XRX5 114 aa2.71□□□□□ -1.97
GEN1-201ENST00000317402 TENM4Q6N022 2769 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 DEFB136Q30KP8 78 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 TMEM263Q8WUH6 116 aaKnown RBP2.71□□□□□ -1.98
GEN1-201ENST00000317402 SMAD5-AS1Q9Y6J3 95 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 SDHAF1A6NFY7 115 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 PRR4Q16378 134 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 TRBV7-7A0A0K0K1E9 115 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 FAM19A4Q96LR4 140 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 IGLV11-55A0A075B6I3 123 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 A0A096LNJ9 63 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 H3BUX3 64 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 CRYGAP11844 174 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 Q96MF0 132 aa2.71□□□□□ -1.98
GEN1-201ENST00000317402 AVPP01185 164 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 XCL1P47992 114 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 FAM222AQ5U5X8 452 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 TRAV7A0A075B6U4 112 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 IGHV4-38-2P0DP08 117 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 LHBP01229 141 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 IGHV1-69P01742 117 aa2.7□□□□□ -1.98
GEN1-201ENST00000317402 SPART-AS1P0CW21 52 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms