RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
SEC22A-201ENST00000309934 FN1P02751 2386 aaKnown RBP4.42□□□□□ -1.7
SEC22A-201ENST00000309934 WDFY4Q6ZS81 3184 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 TRBV6-4A0A1B0GX49 114 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 BAALC-AS2P0C853 105 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 DEFB121Q5J5C9 76 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 VSIG2Q96IQ7 327 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 MDFIQ99750 246 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 ESM1Q9NQ30 184 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 SORL1Q92673 2214 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 IGHV3-53P01767 116 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
SEC22A-201ENST00000309934 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
SEC22A-201ENST00000309934 SS18Q15532 418 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 C10orf99Q6UWK7 81 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.41□□□□□ -1.7
SEC22A-201ENST00000309934 TIMM21Q9BVV7 248 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 TMEM256-PLSCR3K7ERE1 68 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 RMI2Q96E14 147 aa4.41□□□□□ -1.7
SEC22A-201ENST00000309934 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.7
SEC22A-201ENST00000309934 UBE2BP63146 152 aa4.4□□□□□ -1.7
SEC22A-201ENST00000309934 Q9UF83 564 aa4.4□□□□□ -1.7
SEC22A-201ENST00000309934 SNURFQ9Y675 71 aa4.4□□□□□ -1.7
SEC22A-201ENST00000309934 IGKV2D-26A0A0A0MRZ7 120 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 CD164L2Q6UWJ8 174 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 NACAE9PAV3 2078 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 PRO0255Q9UI72 69 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 ICOSQ9Y6W8 199 aa4.4□□□□□ -1.71
SEC22A-201ENST00000309934 NDUFS5O43920 106 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 RNASE3P12724 160 aaKnown RBP4.39□□□□□ -1.71
SEC22A-201ENST00000309934 POM121L12Q8N7R1 296 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
SEC22A-201ENST00000309934 LINC01546A6NGU7 62 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 F8WEM9 126 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 CRPP02741 224 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 RNF185Q96GF1 192 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 MAST4O15021 2626 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 TRBV7-6A0A0J9YX20 115 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 NDUFC1O43677 76 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
SEC22A-201ENST00000309934 SMCPP49901 116 aaPredicted RBP4.38□□□□□ -1.71
SEC22A-201ENST00000309934 FAM222AQ5U5X8 452 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 OVOL2Q9BRP0 275 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 GDF5OSQ5U4N7 250 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 UBE2AP49459 152 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 WFDC9Q8NEX5 89 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 M0QY20 66 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 PSPHP1O15172 72 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 KALRNO60229 2985 aa4.38□□□□□ -1.71
SEC22A-201ENST00000309934 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 C5orf38Q86SI9 138 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 MSRB1Q9NZV6 116 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 USP24Q9UPU5 2620 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 DEFB130BP0DP73 79 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 DEFB130AP0DP74 79 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 XCL1P47992 114 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 ARHGAP32A7KAX9 2087 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 IGHV1-58A0A0C4DH39 117 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 P0DMU3 169 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 PRR9Q5T870 116 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 MAPKAPK5-AS1Q8N8E1 139 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 NRACQ8N912 160 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 FRYLO94915 3013 aa4.37□□□□□ -1.71
SEC22A-201ENST00000309934 LRCOL1A6NCL2 159 aa4.36□□□□□ -1.71
SEC22A-201ENST00000309934 A6NED7 52 aa4.36□□□□□ -1.71
SEC22A-201ENST00000309934 LEPROTO15243 131 aa4.36□□□□□ -1.71
SEC22A-201ENST00000309934 POLR2KP53803 58 aaKnown RBP4.36□□□□□ -1.71
SEC22A-201ENST00000309934 CHCHD7Q9BUK0 85 aa4.36□□□□□ -1.71
SEC22A-201ENST00000309934 IGHV3-73A0A0B4J1V6 119 aa4.36□□□□□ -1.71
SEC22A-201ENST00000309934 A0A087WVE0 104 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 NKAPP1Q8N9T2 125 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 C11orf45Q8TAV5 145 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 AGRNO00468 2067 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 TRIOO75962 3097 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 NANOS2P60321 138 aaKnown RBP4.35□□□□□ -1.71
SEC22A-201ENST00000309934 MUC7Q8TAX7 377 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
SEC22A-201ENST00000309934 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
SEC22A-201ENST00000309934 PRRC2CQ9Y520 2896 aaKnown RBP4.35□□□□□ -1.71
SEC22A-201ENST00000309934 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
SEC22A-201ENST00000309934 HTN3P15516 51 aa4.34□□□□□ -1.71
SEC22A-201ENST00000309934 UBE2D3P61077 147 aa4.34□□□□□ -1.71
SEC22A-201ENST00000309934 UBE2D2P62837 147 aa4.34□□□□□ -1.71
SEC22A-201ENST00000309934 SMR3AQ99954 134 aa4.34□□□□□ -1.71
SEC22A-201ENST00000309934 RBM12B-AS1Q9P1G2 102 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms