RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FABP2P12104 132 aa14.75□□□□□ -0.05
ATG4D-201ENST00000309469 NDUFA12Q9UI09 145 aa14.75□□□□□ -0.05
ATG4D-201ENST00000309469 TMEM262E9PQX1 116 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 IGHV3-30P01768 117 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 IGHV3-30-5P0DP03 117 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 IGLV5-39A0A0G2JS06 123 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 A0A0J9YXY3 114 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 K7EP34 96 aa14.74□□□□□ -0.05
ATG4D-201ENST00000309469 MRPL23Q16540 153 aaKnown RBP14.74□□□□□ -0.05
ATG4D-201ENST00000309469 COL6A5A8TX70 2615 aa14.73□□□□□ -0.05
ATG4D-201ENST00000309469 A0A1B0GUV1 79 aa14.73□□□□□ -0.05
ATG4D-201ENST00000309469 IGLL5B9A064 214 aa14.73□□□□□ -0.05
ATG4D-201ENST00000309469 ZFAND6Q6FIF0 208 aa14.73□□□□□ -0.05
ATG4D-201ENST00000309469 SPCS1Q9Y6A9 102 aa14.72□□□□□ -0.05
ATG4D-201ENST00000309469 IGKV3OR2-268A0A0C4DH90 116 aa14.72□□□□□ -0.05
ATG4D-201ENST00000309469 SMIM1B2RUZ4 78 aa14.72□□□□□ -0.05
ATG4D-201ENST00000309469 C11orf68Q9H3H3 251 aaKnown RBP14.72□□□□□ -0.05
ATG4D-201ENST00000309469 TMEM238C9JI98 176 aa14.71□□□□□ -0.05
ATG4D-201ENST00000309469 ICOSQ9Y6W8 199 aa14.71□□□□□ -0.05
ATG4D-201ENST00000309469 SH2D6Q7Z4S9 175 aa14.7□□□□□ -0.06
ATG4D-201ENST00000309469 OCIAD2Q56VL3 154 aa14.68□□□□□ -0.06
ATG4D-201ENST00000309469 NDUFA1O15239 70 aa14.68□□□□□ -0.06
ATG4D-201ENST00000309469 LINC00959A0A1B0GUT2 108 aa14.67□□□□□ -0.06
ATG4D-201ENST00000309469 DNAH3Q8TD57 4116 aa14.67□□□□□ -0.06
ATG4D-201ENST00000309469 APOMO95445 188 aa14.66□□□□□ -0.06
ATG4D-201ENST00000309469 PRB2P02812 416 aaPredicted RBP14.66□□□□□ -0.06
ATG4D-201ENST00000309469 LITAFQ99732 161 aa14.66□□□□□ -0.06
ATG4D-201ENST00000309469 PGPEP1Q9NXJ5 209 aa14.66□□□□□ -0.06
ATG4D-201ENST00000309469 A0A0J9YWU9 116 aa14.65□□□□□ -0.06
ATG4D-201ENST00000309469 PCP4P48539 62 aa14.65□□□□□ -0.06
ATG4D-201ENST00000309469 IGHV3OR16-9A0A0B4J2B5 98 aa14.64□□□□□ -0.07
ATG4D-201ENST00000309469 LELP1Q5T871 98 aa14.64□□□□□ -0.07
ATG4D-201ENST00000309469 Q6ZTC4 211 aa14.64□□□□□ -0.07
ATG4D-201ENST00000309469 RPL24P83731 157 aaKnown RBP14.64□□□□□ -0.07
ATG4D-201ENST00000309469 MUSTN1Q8IVN3 82 aa14.64□□□□□ -0.07
ATG4D-201ENST00000309469 K7ERU9 68 aa14.63□□□□□ -0.07
ATG4D-201ENST00000309469 CFC1BP0CG36 223 aa14.63□□□□□ -0.07
ATG4D-201ENST00000309469 CFC1P0CG37 223 aa14.63□□□□□ -0.07
ATG4D-201ENST00000309469 Q9H8V8 135 aa14.63□□□□□ -0.07
ATG4D-201ENST00000309469 H3BNG1 76 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 ADAMTSL4-AS1Q5T5F5 129 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 A4D1N5 150 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 K7EIL1 84 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 TIMM17BO60830 172 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 SS18Q15532 418 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 MDFIQ99750 246 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 SPANXDQ9BXN6 97 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 SPANXCQ9NY87 97 aa14.62□□□□□ -0.07
ATG4D-201ENST00000309469 A0A087WZ39 114 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 TSPAN13O95857 204 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 CLPSL2Q6UWE3 100 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 LYPD5Q6UWN5 251 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 LINC00269Q8N2A0 174 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 Q8N3U1 123 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 ZNF625Q96I27 306 aaPredicted RBP14.6□□□□□ -0.07
ATG4D-201ENST00000309469 ANK2Q01484 3957 aa14.6□□□□□ -0.07
ATG4D-201ENST00000309469 PRSS2P07478 247 aa14.59□□□□□ -0.07
ATG4D-201ENST00000309469 KPRPQ5T749 579 aaPredicted RBP14.59□□□□□ -0.07
ATG4D-201ENST00000309469 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
ATG4D-201ENST00000309469 SPATA25Q9BR10 227 aa14.59□□□□□ -0.07
ATG4D-201ENST00000309469 NANOS2P60321 138 aaKnown RBP14.58□□□□□ -0.07
ATG4D-201ENST00000309469 MIAQ16674 131 aa14.58□□□□□ -0.07
ATG4D-201ENST00000309469 DEFB121Q5J5C9 76 aa14.58□□□□□ -0.07
ATG4D-201ENST00000309469 C5orf38Q86SI9 138 aa14.58□□□□□ -0.07
ATG4D-201ENST00000309469 PRO1854Q9UHT4 67 aa14.58□□□□□ -0.07
ATG4D-201ENST00000309469 ANGP03950 147 aaKnown RBP14.58□□□□□ -0.08
ATG4D-201ENST00000309469 XCL1P47992 114 aa14.58□□□□□ -0.08
ATG4D-201ENST00000309469 CIRBPQ14011 172 aaKnown RBP14.58□□□□□ -0.08
ATG4D-201ENST00000309469 COX7B2Q8TF08 81 aa14.58□□□□□ -0.08
ATG4D-201ENST00000309469 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.57□□□□□ -0.08
ATG4D-201ENST00000309469 TM2D3Q9BRN9 247 aa14.57□□□□□ -0.08
ATG4D-201ENST00000309469 HERV-K104P63124 156 aa14.56□□□□□ -0.08
ATG4D-201ENST00000309469 A0A0B4J2C4 111 aa14.56□□□□□ -0.08
ATG4D-201ENST00000309469 REG3AQ06141 175 aa14.55□□□□□ -0.08
ATG4D-201ENST00000309469 MRAPQ8TCY5 172 aa14.54□□□□□ -0.08
ATG4D-201ENST00000309469 TOMM7Q9P0U1 55 aa14.54□□□□□ -0.08
ATG4D-201ENST00000309469 DEFB131BA0A096LNP1 70 aa14.54□□□□□ -0.08
ATG4D-201ENST00000309469 EIF4EBP3O60516 100 aaPredicted RBP14.54□□□□□ -0.08
ATG4D-201ENST00000309469 RNF151Q2KHN1 245 aa14.54□□□□□ -0.08
ATG4D-201ENST00000309469 NOTCH1P46531 2555 aa14.53□□□□□ -0.08
ATG4D-201ENST00000309469 LOC107984156A0A0G2JMH3 177 aa14.53□□□□□ -0.08
ATG4D-201ENST00000309469 IFITM1P13164 125 aa14.53□□□□□ -0.08
ATG4D-201ENST00000309469 ARL17AQ8IVW1 177 aa14.53□□□□□ -0.08
ATG4D-201ENST00000309469 NPC2P61916 151 aa14.52□□□□□ -0.09
ATG4D-201ENST00000309469 LYRM7Q5U5X0 104 aa14.52□□□□□ -0.09
ATG4D-201ENST00000309469 LINC01561Q8N1V8 128 aa14.52□□□□□ -0.09
ATG4D-201ENST00000309469 DAND5Q8N907 189 aa14.52□□□□□ -0.09
ATG4D-201ENST00000309469 VPS25Q9BRG1 176 aa14.52□□□□□ -0.09
ATG4D-201ENST00000309469 H3BMG7 143 aa14.51□□□□□ -0.09
ATG4D-201ENST00000309469 MEIG1Q5JSS6 88 aa14.51□□□□□ -0.09
ATG4D-201ENST00000309469 SFTA2Q6UW10 78 aa14.51□□□□□ -0.09
ATG4D-201ENST00000309469 CD164L2Q6UWJ8 174 aa14.51□□□□□ -0.09
ATG4D-201ENST00000309469 CHCHD10Q8WYQ3 142 aaPredicted RBP14.51□□□□□ -0.09
ATG4D-201ENST00000309469 IGHV3-33P01772 117 aa14.51□□□□□ -0.09
ATG4D-201ENST00000309469 A0A0U1RRA0 63 aa14.5□□□□□ -0.09
ATG4D-201ENST00000309469 TENM3Q9P273 2699 aa14.49□□□□□ -0.09
ATG4D-201ENST00000309469 IGLV10-54A0A075B6I4 117 aa14.49□□□□□ -0.09
ATG4D-201ENST00000309469 ERG28Q9UKR5 140 aa14.49□□□□□ -0.09
ATG4D-201ENST00000309469 KLK12Q9UKR0 248 aa14.48□□□□□ -0.09
ATG4D-201ENST00000309469 F8W1H4 67 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms