RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 BSPH1Q075Z2 132 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 A0A0J9YWU9 116 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 DEFB131AP59861 70 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 WFDC13Q8IUB5 93 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 K7EMT4 169 aa8.5□□□□□ -1.05
SNIP1-201ENST00000296215 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 IGFL2Q6UWQ7 119 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 NBASA2RRP1 2371 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 MINOS1-NBL1R4GNA1 71 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 IGLV3-9A0A075B6K5 115 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 LHBP01229 141 aa8.49□□□□□ -1.05
SNIP1-201ENST00000296215 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
SNIP1-201ENST00000296215 GPR179Q6PRD1 2367 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 FAM208BQ5VWN6 2430 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 ADORA2A-AS1P86434 159 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 LY6HO94772 140 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
SNIP1-201ENST00000296215 PRR9Q5T870 116 aa8.47□□□□□ -1.05
SNIP1-201ENST00000296215 BBC3Q96PG8 261 aaPredicted RBP8.47□□□□□ -1.05
SNIP1-201ENST00000296215 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
SNIP1-201ENST00000296215 IGHV4-59P01825 116 aa8.47□□□□□ -1.05
SNIP1-201ENST00000296215 PRSS33Q8NF86 280 aa8.47□□□□□ -1.05
SNIP1-201ENST00000296215 AMELXQ99217 191 aa8.47□□□□□ -1.05
SNIP1-201ENST00000296215 ACACBO00763 2458 aa8.46□□□□□ -1.06
SNIP1-201ENST00000296215 Q1T7F1 81 aa8.45□□□□□ -1.06
SNIP1-201ENST00000296215 SMIM1B2RUZ4 78 aa8.45□□□□□ -1.06
SNIP1-201ENST00000296215 E7EQL1 145 aa8.45□□□□□ -1.06
SNIP1-201ENST00000296215 MUC7Q8TAX7 377 aa8.45□□□□□ -1.06
SNIP1-201ENST00000296215 PCNX1Q96RV3 2341 aa8.45□□□□□ -1.06
SNIP1-201ENST00000296215 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
SNIP1-201ENST00000296215 LINC00242Q5T6M2 205 aa8.44□□□□□ -1.06
SNIP1-201ENST00000296215 NOTCH4Q99466 2003 aa8.44□□□□□ -1.06
SNIP1-201ENST00000296215 LITAFQ99732 161 aa8.44□□□□□ -1.06
SNIP1-201ENST00000296215 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
SNIP1-201ENST00000296215 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
SNIP1-201ENST00000296215 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 TECTAO75443 2155 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 K7EQD1 137 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
SNIP1-201ENST00000296215 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 ADAMTS20P59510 1910 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 NPBQ8NG41 125 aa8.42□□□□□ -1.06
SNIP1-201ENST00000296215 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
SNIP1-201ENST00000296215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.41□□□□□ -1.06
SNIP1-201ENST00000296215 LINC00574Q9H8X3 128 aa8.41□□□□□ -1.06
SNIP1-201ENST00000296215 IGLV1-44P01699 117 aa8.41□□□□□ -1.06
SNIP1-201ENST00000296215 PROK1P58294 105 aa8.41□□□□□ -1.06
SNIP1-201ENST00000296215 C11orf72Q8NBR9 251 aa8.41□□□□□ -1.06
SNIP1-201ENST00000296215 PCNTO95613 3336 aa8.41□□□□□ -1.06
SNIP1-201ENST00000296215 IGHV7-81A0A0B4J1V7 117 aa8.4□□□□□ -1.06
SNIP1-201ENST00000296215 CEP192Q8TEP8 1941 aa8.4□□□□□ -1.06
SNIP1-201ENST00000296215 DSCAMO60469 2012 aa8.4□□□□□ -1.06
SNIP1-201ENST00000296215 COX6A2Q02221 97 aa8.4□□□□□ -1.06
SNIP1-201ENST00000296215 COL5A1P20908 1838 aaPredicted RBP8.4□□□□□ -1.06
SNIP1-201ENST00000296215 C16orf95Q9H693 158 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 Q6ZQT0 140 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 WISP2O76076 250 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 LINC00588Q9Y4M8 146 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 SPG11Q96JI7 2443 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 H0Y9J4 135 aa8.39□□□□□ -1.07
SNIP1-201ENST00000296215 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 ATP1A1-AS1Q5TC04 95 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 HTN3P15516 51 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 ZNF462Q96JM2 2506 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 IGLV1-47P01700 117 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 KAAG1Q9UBP8 84 aa8.38□□□□□ -1.07
SNIP1-201ENST00000296215 AVPP01185 164 aa8.37□□□□□ -1.07
SNIP1-201ENST00000296215 SPATA3Q8NHX4 192 aa8.37□□□□□ -1.07
SNIP1-201ENST00000296215 FAM215AQ9Y5M1 114 aa8.37□□□□□ -1.07
SNIP1-201ENST00000296215 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
SNIP1-201ENST00000296215 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
SNIP1-201ENST00000296215 PSCAO43653 123 aa8.36□□□□□ -1.07
SNIP1-201ENST00000296215 SEM1Q6ZVN7 128 aa8.36□□□□□ -1.07
SNIP1-201ENST00000296215 CCL19Q99731 98 aa8.36□□□□□ -1.07
SNIP1-201ENST00000296215 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
SNIP1-201ENST00000296215 H0Y9P7 68 aa8.35□□□□□ -1.07
SNIP1-201ENST00000296215 OTOGLQ3ZCN5 2332 aa8.35□□□□□ -1.07
SNIP1-201ENST00000296215 FSHBP01225 129 aa8.35□□□□□ -1.07
SNIP1-201ENST00000296215 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
SNIP1-201ENST00000296215 K7ERS5 55 aa8.34□□□□□ -1.07
SNIP1-201ENST00000296215 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
SNIP1-201ENST00000296215 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
SNIP1-201ENST00000296215 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
SNIP1-201ENST00000296215 NOP10Q9NPE3 64 aaKnown RBP8.33□□□□□ -1.08
SNIP1-201ENST00000296215 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
SNIP1-201ENST00000296215 A0A096LPF7 62 aa8.33□□□□□ -1.08
SNIP1-201ENST00000296215 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
SNIP1-201ENST00000296215 Q6ZRP5 223 aa8.32□□□□□ -1.08
SNIP1-201ENST00000296215 IGLV5-39A0A0G2JS06 123 aa8.32□□□□□ -1.08
SNIP1-201ENST00000296215 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
SNIP1-201ENST00000296215 CCDC140Q96MF4 163 aa8.32□□□□□ -1.08
SNIP1-201ENST00000296215 REG3AQ06141 175 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms