RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 PCNX1Q96RV3 2341 aa6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 FAM167A-AS1Q96KT0 104 aa6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 BBC3Q96PG8 261 aaPredicted RBP6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 U3KQK5 164 aa6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 DPM3Q9P2X0 92 aa6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
CTDSPL-201ENST00000273179 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 LINC00322Q6ZN03 302 aaPredicted RBP6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 TMEM167AQ8TBQ9 72 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 LRBAP50851 2863 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 CCL3L1P16619 93 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 PATE2Q6UY27 113 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 LINC00208Q96KT6 92 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 RNF5Q99942 180 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 IGLV3-9A0A075B6K5 115 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 IGHV3OR16-10A0A075B7F0 116 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
CTDSPL-201ENST00000273179 PMS2P5A8MQ11 134 aa6.34□□□□□ -1.39
CTDSPL-201ENST00000273179 DEFB104AQ8WTQ1 72 aa6.34□□□□□ -1.39
CTDSPL-201ENST00000273179 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.4
CTDSPL-201ENST00000273179 DOPEY2Q9Y3R5 2298 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 KLLNB2CW77 178 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 LINC00476Q8WZB0 136 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 MED13LQ71F56 2210 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 Q8N814 137 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 IGLV5-45A0A087WSX0 123 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 PSCAO43653 123 aa6.33□□□□□ -1.4
CTDSPL-201ENST00000273179 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 IGHV3-21A0A0B4J1V1 117 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 ZNF580Q9UK33 172 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 IGF2RP11717 2491 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 COL27A1Q8IZC6 1860 aaPredicted RBP6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 APELAP0DMC3 54 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 Q5VV11 94 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 LINC01560Q8TB33 94 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 KMT2EQ8IZD2 1858 aa6.32□□□□□ -1.4
CTDSPL-201ENST00000273179 C9orf66Q5T8R8 295 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 C22orf34Q6ZV56 151 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 NDUFA4L2Q9NRX3 87 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 CHD8Q9HCK8 2581 aa6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
CTDSPL-201ENST00000273179 C17orf58Q2M2W7 97 aa6.3□□□□□ -1.4
CTDSPL-201ENST00000273179 CHTF8P0CG12 524 aa6.3□□□□□ -1.4
CTDSPL-201ENST00000273179 ZNF833PQ6ZTB9 187 aa6.3□□□□□ -1.4
CTDSPL-201ENST00000273179 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
CTDSPL-201ENST00000273179 FAM215AQ9Y5M1 114 aa6.3□□□□□ -1.4
CTDSPL-201ENST00000273179 PDE6GP18545 87 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 LINC01547P58512 204 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 MOBPQ13875 183 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 Q6ZPA2 131 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 SLPIP03973 132 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 TLN1Q9Y490 2541 aaKnown RBP6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 K7EQG2 157 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 LINC00158P58513 81 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 SMAD5-AS1Q9Y6J3 95 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 B4DSR2 109 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 COX6B1P14854 86 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.29□□□□□ -1.4
CTDSPL-201ENST00000273179 MAP1AP78559 2803 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 LHBP01229 141 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 PKDREJQ9NTG1 2253 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 PDE6HQ13956 83 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 C19orf73Q9NVV2 129 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 KAAG1Q9UBP8 84 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 NCOR2Q9Y618 2525 aa6.28□□□□□ -1.4
CTDSPL-201ENST00000273179 TRBV6-5A0A0K0K1A5 114 aa6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 MINOS1Q5TGZ0 78 aa6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 MINOS1-NBL1R4GNA1 71 aa6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 DAZAP2Q15038 168 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 C10orf55Q5SWW7 151 aa6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 A8MU10 97 aa6.27□□□□□ -1.41
CTDSPL-201ENST00000273179 AKAP6Q13023 2319 aa6.26□□□□□ -1.41
CTDSPL-201ENST00000273179 IGHV3-16A0A0C4DH30 117 aa6.26□□□□□ -1.41
CTDSPL-201ENST00000273179 RPL37AP8A6NKH3 93 aa6.26□□□□□ -1.41
CTDSPL-201ENST00000273179 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
CTDSPL-201ENST00000273179 NDUFA4O00483 81 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 P0C879 139 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 MALRD1Q5VYJ5 2156 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 VPS13CQ709C8 3753 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 LINC00574Q9H8X3 128 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 XAGE1AQ9HD64 81 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 TOMM7Q9P0U1 55 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 LMO4P61968 165 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 LYPD2Q6UXB3 125 aa6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
CTDSPL-201ENST00000273179 ZNF702PQ9H963 129 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms