RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IGHV3-73A0A0B4J1V6 119 aa11.33□□□□□ -0.6
CTDSP1-201ENST00000273062 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
CTDSP1-201ENST00000273062 C19orf54Q5BKX5 351 aa11.33□□□□□ -0.6
CTDSP1-201ENST00000273062 UBR5O95071 2799 aaPredicted RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1BA6NDE4 496 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1EA6NEQ0 496 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1DP0C7P1 496 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1A1P0DJD3 496 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1CP0DJD4 496 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 BRK1Q8WUW1 75 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 V9GYY9 64 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 PROK1P58294 105 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
CTDSP1-201ENST00000273062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-201ENST00000273062 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
CTDSP1-201ENST00000273062 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
CTDSP1-201ENST00000273062 COX6A2Q02221 97 aa11.3□□□□□ -0.6
CTDSP1-201ENST00000273062 C1orf195Q5TG92 126 aa11.29□□□□□ -0.6
CTDSP1-201ENST00000273062 A6NDX4 124 aa11.29□□□□□ -0.6
CTDSP1-201ENST00000273062 KLLNB2CW77 178 aa11.29□□□□□ -0.6
CTDSP1-201ENST00000273062 SLPIP03973 132 aa11.29□□□□□ -0.6
CTDSP1-201ENST00000273062 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
CTDSP1-201ENST00000273062 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
CTDSP1-201ENST00000273062 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
CTDSP1-201ENST00000273062 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
CTDSP1-201ENST00000273062 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-201ENST00000273062 CUBNO60494 3623 aa11.28□□□□□ -0.6
CTDSP1-201ENST00000273062 ZNF843Q8N446 348 aa11.27□□□□□ -0.6
CTDSP1-201ENST00000273062 SNURFQ9Y675 71 aa11.27□□□□□ -0.6
CTDSP1-201ENST00000273062 B4DSR2 109 aa11.27□□□□□ -0.61
CTDSP1-201ENST00000273062 HIST2H2BCQ6DN03 193 aa11.27□□□□□ -0.61
CTDSP1-201ENST00000273062 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.61
CTDSP1-201ENST00000273062 LINC00482Q8N8I6 264 aa11.27□□□□□ -0.61
CTDSP1-201ENST00000273062 SS18Q15532 418 aa11.26□□□□□ -0.61
CTDSP1-201ENST00000273062 LINC00337Q8N6G1 96 aa11.26□□□□□ -0.61
CTDSP1-201ENST00000273062 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
CTDSP1-201ENST00000273062 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
CTDSP1-201ENST00000273062 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
CTDSP1-201ENST00000273062 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
CTDSP1-201ENST00000273062 A0A096LNT2 108 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 CHCHD7Q9BUK0 85 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 RMI2Q96E14 147 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
CTDSP1-201ENST00000273062 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
CTDSP1-201ENST00000273062 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
CTDSP1-201ENST00000273062 LECT2O14960 151 aa11.23□□□□□ -0.61
CTDSP1-201ENST00000273062 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 IGKV2-28A0A075B6P5 120 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 IGKV2D-28P01615 120 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 SMIM11BQ8TCY0 68 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 DOPEY2Q9Y3R5 2298 aa11.22□□□□□ -0.61
CTDSP1-201ENST00000273062 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.62
CTDSP1-201ENST00000273062 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.62
CTDSP1-201ENST00000273062 IL17DQ8TAD2 202 aa11.2□□□□□ -0.62
CTDSP1-201ENST00000273062 SORL1Q92673 2214 aa11.2□□□□□ -0.62
CTDSP1-201ENST00000273062 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
CTDSP1-201ENST00000273062 F8WEM9 126 aa11.2□□□□□ -0.62
CTDSP1-201ENST00000273062 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 CRPP02741 224 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 Q6ZSN1 163 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 SMIM1B2RUZ4 78 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 IGLV1-40P01703 118 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 DSCR9P59020 149 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 CFHR3Q02985 330 aa11.19□□□□□ -0.62
CTDSP1-201ENST00000273062 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 TRBV7-6A0A0J9YX20 115 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 NDUFA4O00483 81 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 CCKP06307 115 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 CREBBPQ92793 2442 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 TLN2Q9Y4G6 2542 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 PRM2P04554 102 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 FAM229BQ4G0N7 80 aa11.18□□□□□ -0.62
CTDSP1-201ENST00000273062 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
CTDSP1-201ENST00000273062 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
CTDSP1-201ENST00000273062 APCP25054 2843 aa11.17□□□□□ -0.62
CTDSP1-201ENST00000273062 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
CTDSP1-201ENST00000273062 HTN1P15515 57 aa11.16□□□□□ -0.62
CTDSP1-201ENST00000273062 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
CTDSP1-201ENST00000273062 TRAV13-2A0A0B4J235 113 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 TRAV10A0A0B4J240 114 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 CR1P17927 2039 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 TENM4Q6N022 2769 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 H3BUA1 57 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 RPL36AP83881 106 aaKnown RBP11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 RPL36ALQ969Q0 106 aaKnown RBP11.15□□□□□ -0.62
CTDSP1-201ENST00000273062 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
CTDSP1-201ENST00000273062 Q6ZTI0 123 aa11.14□□□□□ -0.63
CTDSP1-201ENST00000273062 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
CTDSP1-201ENST00000273062 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
CTDSP1-201ENST00000273062 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
CTDSP1-201ENST00000273062 TRAV7A0A075B6U4 112 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms