RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 TOMM7Q9P0U1 55 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 ACANP16112 2415 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 Q9HAA7 133 aa12□□□□□ -0.49
RTN1-201ENST00000267484 SHISA2Q6UWI4 295 aa11.99□□□□□ -0.49
RTN1-201ENST00000267484 APCP25054 2843 aa11.99□□□□□ -0.49
RTN1-201ENST00000267484 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
RTN1-201ENST00000267484 Q6Q795 121 aa11.99□□□□□ -0.49
RTN1-201ENST00000267484 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
RTN1-201ENST00000267484 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
RTN1-201ENST00000267484 DEFB121Q5J5C9 76 aa11.99□□□□□ -0.49
RTN1-201ENST00000267484 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
RTN1-201ENST00000267484 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
RTN1-201ENST00000267484 USP24Q9UPU5 2620 aa11.98□□□□□ -0.49
RTN1-201ENST00000267484 UBE2L6O14933 153 aa11.98□□□□□ -0.49
RTN1-201ENST00000267484 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
RTN1-201ENST00000267484 RPL35AP18077 110 aaKnown RBP11.97□□□□□ -0.49
RTN1-201ENST00000267484 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
RTN1-201ENST00000267484 TRGV2A0A075B6R0 118 aa11.96□□□□□ -0.49
RTN1-201ENST00000267484 FAM240AA0A1B0GVK7 77 aa11.95□□□□□ -0.5
RTN1-201ENST00000267484 MIR7-3HGQ8N6C7 128 aa11.95□□□□□ -0.5
RTN1-201ENST00000267484 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
RTN1-201ENST00000267484 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
RTN1-201ENST00000267484 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
RTN1-201ENST00000267484 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
RTN1-201ENST00000267484 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
RTN1-201ENST00000267484 CCL24O00175 119 aa11.94□□□□□ -0.5
RTN1-201ENST00000267484 GIG44P09565 113 aaPredicted RBP11.94□□□□□ -0.5
RTN1-201ENST00000267484 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
RTN1-201ENST00000267484 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
RTN1-201ENST00000267484 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
RTN1-201ENST00000267484 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
RTN1-201ENST00000267484 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
RTN1-201ENST00000267484 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
RTN1-201ENST00000267484 UBR5O95071 2799 aaPredicted RBP11.92□□□□□ -0.5
RTN1-201ENST00000267484 GCN1Q92616 2671 aaKnown RBP11.92□□□□□ -0.5
RTN1-201ENST00000267484 IGKV2-28A0A075B6P5 120 aa11.92□□□□□ -0.5
RTN1-201ENST00000267484 IGKV2D-28P01615 120 aa11.92□□□□□ -0.5
RTN1-201ENST00000267484 PLAC8L1A1L4L8 177 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 LINC00158P58513 81 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 DEFB113Q30KQ7 82 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 PFN2P35080 140 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 SVIPQ8NHG7 77 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 SND1-IT1Q9HBX3 110 aa11.91□□□□□ -0.5
RTN1-201ENST00000267484 DNAJC9-AS1A6NH13 148 aa11.9□□□□□ -0.5
RTN1-201ENST00000267484 HERV-K104P63124 156 aa11.9□□□□□ -0.5
RTN1-201ENST00000267484 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
RTN1-201ENST00000267484 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
RTN1-201ENST00000267484 BBC3Q96PG8 261 aaPredicted RBP11.9□□□□□ -0.5
RTN1-201ENST00000267484 CRPP02741 224 aa11.9□□□□□ -0.5
RTN1-201ENST00000267484 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
RTN1-201ENST00000267484 TRGV4A0A0C4DH28 118 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 TRACP01848 142 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 GAGE2AQ6NT46 116 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 ESM1Q9NQ30 184 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 A0A087WYN8 130 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 TRBV7-7A0A0K0K1E9 115 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 ATP5G1P05496 136 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 COPS9Q8WXC6 57 aa11.89□□□□□ -0.51
RTN1-201ENST00000267484 SMIM20Q8N5G0 67 aa11.88□□□□□ -0.51
RTN1-201ENST00000267484 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
RTN1-201ENST00000267484 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
RTN1-201ENST00000267484 CCL18P55774 89 aa11.86□□□□□ -0.51
RTN1-201ENST00000267484 MALP21145 153 aa11.85□□□□□ -0.51
RTN1-201ENST00000267484 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
RTN1-201ENST00000267484 TRAV13-2A0A0B4J235 113 aa11.85□□□□□ -0.51
RTN1-201ENST00000267484 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
RTN1-201ENST00000267484 KRTAP1-3Q8IUG1 177 aa11.85□□□□□ -0.51
RTN1-201ENST00000267484 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
RTN1-201ENST00000267484 ACYP1P07311 99 aa11.84□□□□□ -0.51
RTN1-201ENST00000267484 DEFB130BP0DP73 79 aa11.84□□□□□ -0.51
RTN1-201ENST00000267484 DEFB130AP0DP74 79 aa11.84□□□□□ -0.51
RTN1-201ENST00000267484 SLPIP03973 132 aa11.83□□□□□ -0.51
RTN1-201ENST00000267484 C16orf74Q96GX8 76 aa11.83□□□□□ -0.51
RTN1-201ENST00000267484 IGHV3OR16-9A0A0B4J2B5 98 aa11.83□□□□□ -0.52
RTN1-201ENST00000267484 OR13C6PQ8NH95 151 aa11.83□□□□□ -0.52
RTN1-201ENST00000267484 C14orf132Q9NPU4 83 aa11.83□□□□□ -0.52
RTN1-201ENST00000267484 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
RTN1-201ENST00000267484 PAX4O43316 350 aa11.82□□□□□ -0.52
RTN1-201ENST00000267484 LINC00643Q86TS7 51 aa11.82□□□□□ -0.52
RTN1-201ENST00000267484 A0A096LPF7 62 aa11.82□□□□□ -0.52
RTN1-201ENST00000267484 FHL2Q14192 279 aa11.82□□□□□ -0.52
RTN1-201ENST00000267484 TRBV6-4A0A1B0GX49 114 aa11.82□□□□□ -0.52
RTN1-201ENST00000267484 DNAL4O96015 105 aa11.81□□□□□ -0.52
RTN1-201ENST00000267484 LECT2O14960 151 aa11.8□□□□□ -0.52
RTN1-201ENST00000267484 XCL1P47992 114 aa11.8□□□□□ -0.52
RTN1-201ENST00000267484 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
RTN1-201ENST00000267484 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
RTN1-201ENST00000267484 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
RTN1-201ENST00000267484 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
RTN1-201ENST00000267484 NCR3O14931 201 aa11.78□□□□□ -0.52
RTN1-201ENST00000267484 PF4P02776 101 aa11.78□□□□□ -0.52
RTN1-201ENST00000267484 LINC01006Q8NI28 216 aa11.78□□□□□ -0.52
RTN1-201ENST00000267484 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.52
RTN1-201ENST00000267484 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.52
RTN1-201ENST00000267484 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
RTN1-201ENST00000267484 A0A087WZ39 114 aa11.77□□□□□ -0.53
RTN1-201ENST00000267484 LINC00959A0A1B0GUT2 108 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms