RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 Q6ZTI0 123 aa12.6□□□□□ -0.39
SRF-201ENST00000265354 LINC00308Q8TCZ7 52 aa12.6□□□□□ -0.39
SRF-201ENST00000265354 SNURFQ9Y675 71 aa12.6□□□□□ -0.39
SRF-201ENST00000265354 ZNF292O60281 2723 aa12.59□□□□□ -0.39
SRF-201ENST00000265354 F8P00451 2351 aa12.59□□□□□ -0.39
SRF-201ENST00000265354 Q6Q795 121 aa12.59□□□□□ -0.39
SRF-201ENST00000265354 SPTSSBQ8NFR3 76 aa12.59□□□□□ -0.39
SRF-201ENST00000265354 Q9UF83 564 aa12.59□□□□□ -0.39
SRF-201ENST00000265354 DCANP1Q8TF63 244 aa12.58□□□□□ -0.39
SRF-201ENST00000265354 SERP2Q8N6R1 65 aa12.58□□□□□ -0.4
SRF-201ENST00000265354 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
SRF-201ENST00000265354 C18orf65Q6ZTR6 163 aa12.58□□□□□ -0.4
SRF-201ENST00000265354 Q96MF0 132 aa12.58□□□□□ -0.4
SRF-201ENST00000265354 SS18Q15532 418 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 RETNQ9HD89 108 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 WFDC9Q8NEX5 89 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 LINC00526Q96FQ7 95 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 AVPP01185 164 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
SRF-201ENST00000265354 MRPL55Q7Z7F7 128 aaKnown RBP12.56□□□□□ -0.4
SRF-201ENST00000265354 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
SRF-201ENST00000265354 COX7A2LO14548 114 aa12.55□□□□□ -0.4
SRF-201ENST00000265354 DSCR9P59020 149 aa12.55□□□□□ -0.4
SRF-201ENST00000265354 RPL18AQ02543 176 aaKnown RBP12.55□□□□□ -0.4
SRF-201ENST00000265354 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
SRF-201ENST00000265354 FHL3Q13643 280 aa12.55□□□□□ -0.4
SRF-201ENST00000265354 LST1O00453 97 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
SRF-201ENST00000265354 TIMM17BO60830 172 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 SEC61GP60059 68 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 SOSTDC1Q6X4U4 206 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 COX7B2Q8TF08 81 aa12.54□□□□□ -0.4
SRF-201ENST00000265354 DMDP11532 3685 aa12.53□□□□□ -0.4
SRF-201ENST00000265354 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
SRF-201ENST00000265354 DEFB4AO15263 64 aa12.53□□□□□ -0.4
SRF-201ENST00000265354 NCR3O14931 201 aa12.53□□□□□ -0.4
SRF-201ENST00000265354 K7EQD1 137 aa12.52□□□□□ -0.4
SRF-201ENST00000265354 ORMDL1Q9P0S3 153 aa12.52□□□□□ -0.4
SRF-201ENST00000265354 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.41
SRF-201ENST00000265354 C9orf85Q96MD7 179 aa12.52□□□□□ -0.41
SRF-201ENST00000265354 IMUPQ9GZP8 106 aa12.51□□□□□ -0.41
SRF-201ENST00000265354 J3QLI3 93 aa12.51□□□□□ -0.41
SRF-201ENST00000265354 KIF25-AS1Q9Y6Z4 181 aa12.51□□□□□ -0.41
SRF-201ENST00000265354 Q6ZSN1 163 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 USP24Q9UPU5 2620 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 LINC00315P59091 139 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 CHD6Q8TD26 2715 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 UBE2D4Q9Y2X8 147 aa12.5□□□□□ -0.41
SRF-201ENST00000265354 COX6A2Q02221 97 aa12.49□□□□□ -0.41
SRF-201ENST00000265354 TIRAPP58753 221 aa12.49□□□□□ -0.41
SRF-201ENST00000265354 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
SRF-201ENST00000265354 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
SRF-201ENST00000265354 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
SRF-201ENST00000265354 CCL24O00175 119 aa12.48□□□□□ -0.41
SRF-201ENST00000265354 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
SRF-201ENST00000265354 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
SRF-201ENST00000265354 ASH1LQ9NR48 2969 aaKnown RBP12.47□□□□□ -0.41
SRF-201ENST00000265354 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
SRF-201ENST00000265354 FAM240AA0A1B0GVK7 77 aa12.47□□□□□ -0.41
SRF-201ENST00000265354 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
SRF-201ENST00000265354 LAMA5O15230 3695 aa12.47□□□□□ -0.41
SRF-201ENST00000265354 NDUFC2-KCTD14E9PQ53 114 aa12.47□□□□□ -0.41
SRF-201ENST00000265354 GYPEP15421 78 aa12.47□□□□□ -0.41
SRF-201ENST00000265354 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.41
SRF-201ENST00000265354 LINC01546A6NGU7 62 aa12.45□□□□□ -0.42
SRF-201ENST00000265354 NDUFA1O15239 70 aa12.45□□□□□ -0.42
SRF-201ENST00000265354 PYGO1Q9Y3Y4 419 aa12.45□□□□□ -0.42
SRF-201ENST00000265354 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
SRF-201ENST00000265354 H0YGX0 51 aa12.43□□□□□ -0.42
SRF-201ENST00000265354 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
SRF-201ENST00000265354 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
SRF-201ENST00000265354 Q8N2B8 174 aa12.42□□□□□ -0.42
SRF-201ENST00000265354 ZNF575Q86XF7 245 aa12.4□□□□□ -0.42
SRF-201ENST00000265354 PRR4Q16378 134 aa12.4□□□□□ -0.42
SRF-201ENST00000265354 PRO0628Q9UI54 55 aa12.4□□□□□ -0.42
SRF-201ENST00000265354 ATRQ13535 2644 aa12.39□□□□□ -0.43
SRF-201ENST00000265354 EIF4EBP3O60516 100 aaPredicted RBP12.39□□□□□ -0.43
SRF-201ENST00000265354 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
SRF-201ENST00000265354 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
SRF-201ENST00000265354 F8WEM9 126 aa12.39□□□□□ -0.43
SRF-201ENST00000265354 SMIM26A0A096LP01 95 aa12.38□□□□□ -0.43
SRF-201ENST00000265354 PRR3P79522 188 aaKnown RBP12.38□□□□□ -0.43
SRF-201ENST00000265354 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
SRF-201ENST00000265354 SMIM11BQ8TCY0 68 aa12.38□□□□□ -0.43
SRF-201ENST00000265354 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
SRF-201ENST00000265354 DEFB105AQ8NG35 78 aa12.37□□□□□ -0.43
SRF-201ENST00000265354 TNRC18O15417 2968 aaPredicted RBP12.37□□□□□ -0.43
SRF-201ENST00000265354 AMELXQ99217 191 aa12.36□□□□□ -0.43
SRF-201ENST00000265354 SMIM1B2RUZ4 78 aa12.35□□□□□ -0.43
SRF-201ENST00000265354 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
SRF-201ENST00000265354 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
SRF-201ENST00000265354 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
SRF-201ENST00000265354 RELNP78509 3460 aa12.34□□□□□ -0.43
SRF-201ENST00000265354 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.44
SRF-201ENST00000265354 BRI3O95415 125 aa12.33□□□□□ -0.44
SRF-201ENST00000265354 CXCL5P42830 114 aa12.33□□□□□ -0.44
SRF-201ENST00000265354 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
SRF-201ENST00000265354 CCL18P55774 89 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms