RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 VWFP04275 2813 aa9.07□□□□□ -0.96
SPTLC1-201ENST00000262554 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 SMIM1B2RUZ4 78 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 PRSS2P07478 247 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 MIAQ16674 131 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 IGHV4-28A0A0C4DH34 117 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 H3BMG7 143 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 MIFP14174 115 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
SPTLC1-201ENST00000262554 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 F5H768 121 aa9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 F8W1H4 67 aa9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 DEFB4AO15263 64 aa9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 PAX4O43316 350 aa9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
SPTLC1-201ENST00000262554 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
SPTLC1-201ENST00000262554 K7ERU9 68 aa9.04□□□□□ -0.96
SPTLC1-201ENST00000262554 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
SPTLC1-201ENST00000262554 DAD1P61803 113 aa9.04□□□□□ -0.96
SPTLC1-201ENST00000262554 Q9H8V8 135 aa9.04□□□□□ -0.96
SPTLC1-201ENST00000262554 IFITM1P13164 125 aa9.03□□□□□ -0.96
SPTLC1-201ENST00000262554 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
SPTLC1-201ENST00000262554 Q8NAQ8 132 aa9.03□□□□□ -0.96
SPTLC1-201ENST00000262554 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SPTLC1-201ENST00000262554 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
SPTLC1-201ENST00000262554 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.96
SPTLC1-201ENST00000262554 IGHV3-33P01772 117 aa9.02□□□□□ -0.96
SPTLC1-201ENST00000262554 PSMB2P49721 201 aa9.02□□□□□ -0.96
SPTLC1-201ENST00000262554 ATRQ13535 2644 aa9.02□□□□□ -0.96
SPTLC1-201ENST00000262554 RBX1P62877 108 aa9.02□□□□□ -0.97
SPTLC1-201ENST00000262554 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 ATP5G1P05496 136 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 SPART-AS1P0CW21 52 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 HERV-K104P63124 156 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 PRIMA1Q86XR5 153 aa9.01□□□□□ -0.97
SPTLC1-201ENST00000262554 A0A096LPF7 62 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 A0A1B0GUV1 79 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 NPC2P61916 151 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
SPTLC1-201ENST00000262554 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 H7C2G1 150 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 WFDC2Q14508 124 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 Q1RN00 199 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 COPS9Q8WXC6 57 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 CELA1Q9UNI1 258 aa9□□□□□ -0.97
SPTLC1-201ENST00000262554 F8P00451 2351 aa8.99□□□□□ -0.97
SPTLC1-201ENST00000262554 MEIG1Q5JSS6 88 aa8.99□□□□□ -0.97
SPTLC1-201ENST00000262554 DAND5Q8N907 189 aa8.99□□□□□ -0.97
SPTLC1-201ENST00000262554 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
SPTLC1-201ENST00000262554 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
SPTLC1-201ENST00000262554 LINC00959A0A1B0GUT2 108 aa8.98□□□□□ -0.97
SPTLC1-201ENST00000262554 C3orf56Q8N813 242 aa8.98□□□□□ -0.97
SPTLC1-201ENST00000262554 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
SPTLC1-201ENST00000262554 TCL1BO95988 128 aa8.98□□□□□ -0.97
SPTLC1-201ENST00000262554 MTURNQ8N3F0 131 aa8.98□□□□□ -0.97
SPTLC1-201ENST00000262554 TRAV26-1A0A087WT03 109 aa8.97□□□□□ -0.97
SPTLC1-201ENST00000262554 A0A087WZ39 114 aa8.97□□□□□ -0.97
SPTLC1-201ENST00000262554 SS18Q15532 418 aa8.97□□□□□ -0.97
SPTLC1-201ENST00000262554 LINC00308Q8TCZ7 52 aa8.97□□□□□ -0.97
SPTLC1-201ENST00000262554 NBEAL2Q6ZNJ1 2754 aa8.96□□□□□ -0.97
SPTLC1-201ENST00000262554 TEX48A0A1B0GUV7 120 aa8.96□□□□□ -0.97
SPTLC1-201ENST00000262554 G3V4G9 280 aa8.96□□□□□ -0.97
SPTLC1-201ENST00000262554 VPS25Q9BRG1 176 aa8.96□□□□□ -0.97
SPTLC1-201ENST00000262554 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.97
SPTLC1-201ENST00000262554 A0A0U1RRA0 63 aa8.96□□□□□ -0.98
SPTLC1-201ENST00000262554 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1-201ENST00000262554 SHISA2Q6UWI4 295 aa8.96□□□□□ -0.98
SPTLC1-201ENST00000262554 TRBV30A0A0K0K1B3 111 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 HTN3P15516 51 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 KRTAP10-11P60412 298 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 SH2D6Q7Z4S9 175 aa8.95□□□□□ -0.98
SPTLC1-201ENST00000262554 C5orf38Q86SI9 138 aa8.94□□□□□ -0.98
SPTLC1-201ENST00000262554 ICOSQ9Y6W8 199 aa8.94□□□□□ -0.98
SPTLC1-201ENST00000262554 EGFEM1PQ0D2K5 195 aa8.94□□□□□ -0.98
SPTLC1-201ENST00000262554 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
SPTLC1-201ENST00000262554 TRIAP1O43715 76 aa8.93□□□□□ -0.98
SPTLC1-201ENST00000262554 RPL13AP40429 203 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-201ENST00000262554 XCL1P47992 114 aa8.93□□□□□ -0.98
SPTLC1-201ENST00000262554 J3QR89 54 aa8.92□□□□□ -0.98
SPTLC1-201ENST00000262554 COX6CP09669 75 aa8.92□□□□□ -0.98
SPTLC1-201ENST00000262554 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
SPTLC1-201ENST00000262554 ATXN8Q156A1 80 aa8.91□□□□□ -0.98
SPTLC1-201ENST00000262554 SOSTDC1Q6X4U4 206 aa8.91□□□□□ -0.98
SPTLC1-201ENST00000262554 LINC00269Q8N2A0 174 aa8.91□□□□□ -0.98
SPTLC1-201ENST00000262554 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-201ENST00000262554 LINC01561Q8N1V8 128 aa8.91□□□□□ -0.98
SPTLC1-201ENST00000262554 LELP1Q5T871 98 aa8.9□□□□□ -0.98
SPTLC1-201ENST00000262554 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 RETNQ9HD89 108 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 IBA57-AS1B1ANH7 110 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms