RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 CITED2Q99967 270 aaPredicted RBP11.61□□□□□ -0.55
SNCAIP-202ENST00000261368 CLPSL2Q6UWE3 100 aa11.6□□□□□ -0.55
SNCAIP-202ENST00000261368 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
SNCAIP-202ENST00000261368 CITED1Q99966 193 aa11.6□□□□□ -0.55
SNCAIP-202ENST00000261368 A0A096LPF7 62 aa11.6□□□□□ -0.55
SNCAIP-202ENST00000261368 COX7A2LO14548 114 aa11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 DAZ2Q13117 558 aaKnown RBP11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 DAZ4Q86SG3 579 aaKnown RBP11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 DAZ3Q9NR90 486 aaKnown RBP11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
SNCAIP-202ENST00000261368 NBEAL2Q6ZNJ1 2754 aa11.58□□□□□ -0.56
SNCAIP-202ENST00000261368 TIMM17BO60830 172 aa11.58□□□□□ -0.56
SNCAIP-202ENST00000261368 RNASE1P07998 156 aaKnown RBP11.58□□□□□ -0.56
SNCAIP-202ENST00000261368 DEFB113Q30KQ7 82 aa11.58□□□□□ -0.56
SNCAIP-202ENST00000261368 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
SNCAIP-202ENST00000261368 BEAN1Q3B7T3 259 aa11.57□□□□□ -0.56
SNCAIP-202ENST00000261368 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
SNCAIP-202ENST00000261368 FAM236AA0A1B0GUQ0 79 aa11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 FAM236BA0A1B0GV22 79 aa11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 ATP5G1P05496 136 aa11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 C6orf226Q5I0X4 101 aa11.56□□□□□ -0.56
SNCAIP-202ENST00000261368 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
SNCAIP-202ENST00000261368 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
SNCAIP-202ENST00000261368 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
SNCAIP-202ENST00000261368 M0QXV9 152 aa11.55□□□□□ -0.56
SNCAIP-202ENST00000261368 TRBV10-1A0A0K0K1A3 114 aa11.54□□□□□ -0.56
SNCAIP-202ENST00000261368 DNAJC9-AS1A6NH13 148 aa11.54□□□□□ -0.56
SNCAIP-202ENST00000261368 XCL1P47992 114 aa11.54□□□□□ -0.56
SNCAIP-202ENST00000261368 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
SNCAIP-202ENST00000261368 HERV-K104P63124 156 aa11.53□□□□□ -0.56
SNCAIP-202ENST00000261368 HIST2H2BCQ6DN03 193 aa11.53□□□□□ -0.56
SNCAIP-202ENST00000261368 A0A096LNT2 108 aa11.52□□□□□ -0.56
SNCAIP-202ENST00000261368 TRAV13-2A0A0B4J235 113 aa11.52□□□□□ -0.57
SNCAIP-202ENST00000261368 IGLV5-39A0A0G2JS06 123 aa11.52□□□□□ -0.57
SNCAIP-202ENST00000261368 SMIM20Q8N5G0 67 aa11.52□□□□□ -0.57
SNCAIP-202ENST00000261368 WFDC11Q8NEX6 87 aa11.52□□□□□ -0.57
SNCAIP-202ENST00000261368 IGLV5-45A0A087WSX0 123 aa11.5□□□□□ -0.57
SNCAIP-202ENST00000261368 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
SNCAIP-202ENST00000261368 IGLV4-60A0A075B6I1 120 aa11.5□□□□□ -0.57
SNCAIP-202ENST00000261368 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
SNCAIP-202ENST00000261368 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
SNCAIP-202ENST00000261368 SLPIP03973 132 aa11.49□□□□□ -0.57
SNCAIP-202ENST00000261368 LECT2O14960 151 aa11.48□□□□□ -0.57
SNCAIP-202ENST00000261368 C16orf74Q96GX8 76 aa11.48□□□□□ -0.57
SNCAIP-202ENST00000261368 C14orf132Q9NPU4 83 aa11.48□□□□□ -0.57
SNCAIP-202ENST00000261368 SETXQ7Z333 2677 aaKnown RBP11.47□□□□□ -0.57
SNCAIP-202ENST00000261368 A8MTW9 85 aa11.47□□□□□ -0.57
SNCAIP-202ENST00000261368 TRAV25A0A0B4J276 109 aa11.47□□□□□ -0.57
SNCAIP-202ENST00000261368 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
SNCAIP-202ENST00000261368 FSHBP01225 129 aa11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 IGLV10-54A0A075B6I4 117 aa11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 MALP21145 153 aa11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 BBC3Q96PG8 261 aaPredicted RBP11.46□□□□□ -0.57
SNCAIP-202ENST00000261368 PF4P02776 101 aa11.46□□□□□ -0.58
SNCAIP-202ENST00000261368 SMIM11BQ8TCY0 68 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 F5H768 121 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 DEFB4AO15263 64 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 TRACP01848 142 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 GYPEP15421 78 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 Q6Q795 121 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 ACYP1P07311 99 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 HTN3P15516 51 aa11.45□□□□□ -0.58
SNCAIP-202ENST00000261368 CCL18P55774 89 aa11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 A0A087WYN8 130 aa11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 CSDC2Q9Y534 153 aaKnown RBP11.44□□□□□ -0.58
SNCAIP-202ENST00000261368 CR1P17927 2039 aa11.43□□□□□ -0.58
SNCAIP-202ENST00000261368 LINC00643Q86TS7 51 aa11.43□□□□□ -0.58
SNCAIP-202ENST00000261368 TMEM86BQ8N661 226 aa11.43□□□□□ -0.58
SNCAIP-202ENST00000261368 SS18Q15532 418 aa11.42□□□□□ -0.58
SNCAIP-202ENST00000261368 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
SNCAIP-202ENST00000261368 SDIM1Q6ZPB5 146 aa11.42□□□□□ -0.58
SNCAIP-202ENST00000261368 NCR3O14931 201 aa11.41□□□□□ -0.58
SNCAIP-202ENST00000261368 TRBV6-4A0A1B0GX49 114 aa11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 LINC01006Q8NI28 216 aa11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 SMCR5Q8TEV8 140 aa11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 APCP25054 2843 aa11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
SNCAIP-202ENST00000261368 CMC4P56277 68 aaPredicted RBP11.39□□□□□ -0.59
SNCAIP-202ENST00000261368 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 ANGP03950 147 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 OVOL2Q9BRP0 275 aa11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 FHL2Q14192 279 aa11.37□□□□□ -0.59
SNCAIP-202ENST00000261368 ZNF843Q8N446 348 aa11.36□□□□□ -0.59
SNCAIP-202ENST00000261368 H0YGX0 51 aa11.36□□□□□ -0.59
SNCAIP-202ENST00000261368 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms