RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 TRAV13-2A0A0B4J235 113 aa12.01□□□□□ -0.49
RAB35-201ENST00000229340 A6NDX4 124 aa12.01□□□□□ -0.49
RAB35-201ENST00000229340 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
RAB35-201ENST00000229340 TRAV23DV6A0A075B6W5 121 aa12□□□□□ -0.49
RAB35-201ENST00000229340 WIPF1O43516 503 aa11.99□□□□□ -0.49
RAB35-201ENST00000229340 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
RAB35-201ENST00000229340 LINC00158P58513 81 aa11.99□□□□□ -0.49
RAB35-201ENST00000229340 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
RAB35-201ENST00000229340 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
RAB35-201ENST00000229340 MYO9AB2RTY4 2548 aa11.98□□□□□ -0.49
RAB35-201ENST00000229340 ZANQ9Y493 2812 aa11.98□□□□□ -0.49
RAB35-201ENST00000229340 GHRHP01286 108 aa11.97□□□□□ -0.49
RAB35-201ENST00000229340 PFN2P35080 140 aa11.97□□□□□ -0.49
RAB35-201ENST00000229340 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
RAB35-201ENST00000229340 FAM19A1Q7Z5A9 133 aa11.97□□□□□ -0.49
RAB35-201ENST00000229340 PRORYQ9H606 182 aa11.97□□□□□ -0.49
RAB35-201ENST00000229340 PSMB8P28062 276 aa11.96□□□□□ -0.49
RAB35-201ENST00000229340 JMJD1CQ15652 2540 aa11.96□□□□□ -0.5
RAB35-201ENST00000229340 IGHV4-61A0A0C4DH41 118 aa11.96□□□□□ -0.5
RAB35-201ENST00000229340 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.5
RAB35-201ENST00000229340 C20orf197Q8N268 126 aa11.95□□□□□ -0.5
RAB35-201ENST00000229340 CCL18P55774 89 aa11.94□□□□□ -0.5
RAB35-201ENST00000229340 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
RAB35-201ENST00000229340 PAX4O43316 350 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
RAB35-201ENST00000229340 PF4P02776 101 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 ENHOQ6UWT2 76 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
RAB35-201ENST00000229340 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
RAB35-201ENST00000229340 RNASE1P07998 156 aaKnown RBP11.92□□□□□ -0.5
RAB35-201ENST00000229340 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
RAB35-201ENST00000229340 SS18Q15532 418 aa11.91□□□□□ -0.5
RAB35-201ENST00000229340 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
RAB35-201ENST00000229340 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
RAB35-201ENST00000229340 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
RAB35-201ENST00000229340 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.5
RAB35-201ENST00000229340 H0YGX0 51 aa11.9□□□□□ -0.5
RAB35-201ENST00000229340 IGHV4-59P01825 116 aa11.9□□□□□ -0.5
RAB35-201ENST00000229340 UBE2E2Q96LR5 201 aa11.9□□□□□ -0.5
RAB35-201ENST00000229340 AVPP01185 164 aa11.9□□□□□ -0.51
RAB35-201ENST00000229340 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
RAB35-201ENST00000229340 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
RAB35-201ENST00000229340 SLURP1P55000 103 aa11.89□□□□□ -0.51
RAB35-201ENST00000229340 C18orf65Q6ZTR6 163 aa11.89□□□□□ -0.51
RAB35-201ENST00000229340 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
RAB35-201ENST00000229340 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
RAB35-201ENST00000229340 CCKP06307 115 aa11.88□□□□□ -0.51
RAB35-201ENST00000229340 ORMDL1Q9P0S3 153 aa11.88□□□□□ -0.51
RAB35-201ENST00000229340 TMEM89A2RUT3 159 aa11.87□□□□□ -0.51
RAB35-201ENST00000229340 UBE2L6O14933 153 aa11.87□□□□□ -0.51
RAB35-201ENST00000229340 IGSF10Q6WRI0 2623 aa11.87□□□□□ -0.51
RAB35-201ENST00000229340 SETD2Q9BYW2 2564 aaPredicted RBP11.87□□□□□ -0.51
RAB35-201ENST00000229340 K7ENP7 123 aa11.87□□□□□ -0.51
RAB35-201ENST00000229340 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
RAB35-201ENST00000229340 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
RAB35-201ENST00000229340 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
RAB35-201ENST00000229340 Q6ZTI0 123 aa11.85□□□□□ -0.51
RAB35-201ENST00000229340 FBN2P35556 2912 aa11.85□□□□□ -0.51
RAB35-201ENST00000229340 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 XCL1P47992 114 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
RAB35-201ENST00000229340 FAM236DA0A1B0GTK5 79 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 FAM236CP0DP71 79 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 KHDC1LQ5JSQ8 128 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
RAB35-201ENST00000229340 K7EQD1 137 aa11.83□□□□□ -0.52
RAB35-201ENST00000229340 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
RAB35-201ENST00000229340 POLQO75417 2590 aa11.83□□□□□ -0.52
RAB35-201ENST00000229340 MYO18BQ8IUG5 2567 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 NDUFC2O95298 119 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 INSP01308 110 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 C19orf84I3L1E1 186 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 MAP6D1Q9H9H5 199 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 CENPEQ02224 2701 aa11.82□□□□□ -0.52
RAB35-201ENST00000229340 DEFB112Q30KQ8 113 aa11.81□□□□□ -0.52
RAB35-201ENST00000229340 SNURFQ9Y675 71 aa11.81□□□□□ -0.52
RAB35-201ENST00000229340 IGLV4-60A0A075B6I1 120 aa11.8□□□□□ -0.52
RAB35-201ENST00000229340 FLNCQ14315 2725 aa11.8□□□□□ -0.52
RAB35-201ENST00000229340 PTPN13Q12923 2485 aa11.8□□□□□ -0.52
RAB35-201ENST00000229340 F8WDY8 70 aa11.8□□□□□ -0.52
RAB35-201ENST00000229340 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
RAB35-201ENST00000229340 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
RAB35-201ENST00000229340 NBPF19A0A087WUL8 3843 aa11.79□□□□□ -0.52
RAB35-201ENST00000229340 UTP20O75691 2785 aaKnown RBP11.79□□□□□ -0.52
RAB35-201ENST00000229340 TRBV6-4A0A1B0GX49 114 aa11.78□□□□□ -0.52
RAB35-201ENST00000229340 H7BZZ5 65 aa11.77□□□□□ -0.52
RAB35-201ENST00000229340 S100A7L2Q5SY68 101 aa11.77□□□□□ -0.52
RAB35-201ENST00000229340 A8MTW9 85 aa11.77□□□□□ -0.53
RAB35-201ENST00000229340 MSMBP08118 114 aa11.77□□□□□ -0.53
RAB35-201ENST00000229340 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 C1orf158Q8N1D5 194 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 UBL5Q9BZL1 73 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 ZNF462Q96JM2 2506 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
RAB35-201ENST00000229340 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 A0A096LNT2 108 aa11.76□□□□□ -0.53
RAB35-201ENST00000229340 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms