RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 LST1O00453 97 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 COX6A2Q02221 97 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 MUC3AQ02505 3323 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 GHRHP01286 108 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 ODF3Q96PU9 254 aa10.02□□□□□ -0.81
NFKB1-201ENST00000226574 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
NFKB1-201ENST00000226574 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
NFKB1-201ENST00000226574 RBMY1FQ15415 496 aaKnown RBP10.01□□□□□ -0.81
NFKB1-201ENST00000226574 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 PYGO1Q9Y3Y4 419 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 NDUFA1O15239 70 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
NFKB1-201ENST00000226574 C4orf3Q8WVX3 66 aa10.01□□□□□ -0.81
NFKB1-201ENST00000226574 CFAP46Q8IYW2 2715 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 DCHS1Q96JQ0 3298 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 PLA2G2AP14555 144 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 Q6YL49 198 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 LINC00482Q8N8I6 264 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 MAST4O15021 2626 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 LRBAP50851 2863 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 ASPMQ8IZT6 3477 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 IGKV2D-24A0A075B6R9 120 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 hADV29S1A0JD25 119 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 COL12A1Q99715 3063 aa10□□□□□ -0.81
NFKB1-201ENST00000226574 FLNAP21333 2647 aaKnown RBP10□□□□□ -0.81
NFKB1-201ENST00000226574 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
NFKB1-201ENST00000226574 IGHV4-31P0DP07 118 aa9.99□□□□□ -0.81
NFKB1-201ENST00000226574 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
NFKB1-201ENST00000226574 KIF25-AS1Q9Y6Z4 181 aa9.99□□□□□ -0.81
NFKB1-201ENST00000226574 TMEM89A2RUT3 159 aa9.99□□□□□ -0.81
NFKB1-201ENST00000226574 SCXQ7RTU7 201 aa9.98□□□□□ -0.81
NFKB1-201ENST00000226574 ATOX1O00244 68 aa9.98□□□□□ -0.81
NFKB1-201ENST00000226574 RBM3P98179 157 aaKnown RBP9.98□□□□□ -0.81
NFKB1-201ENST00000226574 SPAG11BQ08648 103 aa9.98□□□□□ -0.81
NFKB1-201ENST00000226574 TIRAPP58753 221 aa9.98□□□□□ -0.81
NFKB1-201ENST00000226574 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
NFKB1-201ENST00000226574 ASH1LQ9NR48 2969 aaKnown RBP9.98□□□□□ -0.81
NFKB1-201ENST00000226574 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 LINC00315P59091 139 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
NFKB1-201ENST00000226574 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
NFKB1-201ENST00000226574 PRO0461Q9UI25 63 aa9.96□□□□□ -0.82
NFKB1-201ENST00000226574 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 PRO0255Q9UI72 69 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 ITPR3Q14573 2671 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
NFKB1-201ENST00000226574 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
NFKB1-201ENST00000226574 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
NFKB1-201ENST00000226574 A0A087WVE0 104 aa9.94□□□□□ -0.82
NFKB1-201ENST00000226574 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
NFKB1-201ENST00000226574 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
NFKB1-201ENST00000226574 APOC4P55056 127 aa9.93□□□□□ -0.82
NFKB1-201ENST00000226574 ENHOQ6UWT2 76 aa9.93□□□□□ -0.82
NFKB1-201ENST00000226574 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
NFKB1-201ENST00000226574 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
NFKB1-201ENST00000226574 CCL18P55774 89 aa9.92□□□□□ -0.82
NFKB1-201ENST00000226574 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
NFKB1-201ENST00000226574 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
NFKB1-201ENST00000226574 PRORYQ9H606 182 aa9.92□□□□□ -0.82
NFKB1-201ENST00000226574 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
NFKB1-201ENST00000226574 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
NFKB1-201ENST00000226574 REG3AQ06141 175 aa9.91□□□□□ -0.82
NFKB1-201ENST00000226574 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
NFKB1-201ENST00000226574 PSCAO43653 123 aa9.9□□□□□ -0.82
NFKB1-201ENST00000226574 SPART-AS1P0CW21 52 aa9.9□□□□□ -0.82
NFKB1-201ENST00000226574 Q8N2B8 174 aa9.9□□□□□ -0.83
NFKB1-201ENST00000226574 AMELXQ99217 191 aa9.9□□□□□ -0.83
NFKB1-201ENST00000226574 C1orf43Q9BWL3 253 aa9.9□□□□□ -0.83
NFKB1-201ENST00000226574 DMXL1Q9Y485 3027 aa9.9□□□□□ -0.83
NFKB1-201ENST00000226574 ITPR1Q14643 2758 aa9.89□□□□□ -0.83
NFKB1-201ENST00000226574 JMJD7-PLA2G4BH0Y9G9 81 aa9.89□□□□□ -0.83
NFKB1-201ENST00000226574 UQCRQO14949 82 aa9.89□□□□□ -0.83
NFKB1-201ENST00000226574 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
NFKB1-201ENST00000226574 TMEM256-PLSCR3K7ERE1 68 aa9.89□□□□□ -0.83
NFKB1-201ENST00000226574 CXCL5P42830 114 aa9.88□□□□□ -0.83
NFKB1-201ENST00000226574 IBA57-AS1B1ANH7 110 aa9.88□□□□□ -0.83
NFKB1-201ENST00000226574 F8WEM9 126 aa9.88□□□□□ -0.83
NFKB1-201ENST00000226574 J3KT08 172 aa9.88□□□□□ -0.83
NFKB1-201ENST00000226574 GCN1Q92616 2671 aaKnown RBP9.87□□□□□ -0.83
NFKB1-201ENST00000226574 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
NFKB1-201ENST00000226574 LINC01006Q8NI28 216 aa9.87□□□□□ -0.83
NFKB1-201ENST00000226574 UPK3BQ9BT76 320 aa9.87□□□□□ -0.83
NFKB1-201ENST00000226574 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
NFKB1-201ENST00000226574 TIMM17BO60830 172 aa9.86□□□□□ -0.83
NFKB1-201ENST00000226574 COL27A1Q8IZC6 1860 aaPredicted RBP9.86□□□□□ -0.83
NFKB1-201ENST00000226574 A0A087WYN8 130 aa9.86□□□□□ -0.83
NFKB1-201ENST00000226574 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
NFKB1-201ENST00000226574 TRBV6-4A0A1B0GX49 114 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms