RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SPAG11AQ6PDA7 123 aa10.9□□□□□ -0.66
SPTLC2-201ENST00000216484 PYGO1Q9Y3Y4 419 aa10.9□□□□□ -0.66
SPTLC2-201ENST00000216484 TLN2Q9Y4G6 2542 aa10.9□□□□□ -0.67
SPTLC2-201ENST00000216484 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.67
SPTLC2-201ENST00000216484 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
SPTLC2-201ENST00000216484 PROK1P58294 105 aa10.89□□□□□ -0.67
SPTLC2-201ENST00000216484 PRLHP81277 87 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 THSD7BQ9C0I4 1608 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 H0Y9P7 68 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 ZNF843Q8N446 348 aa10.88□□□□□ -0.67
SPTLC2-201ENST00000216484 SBSPONQ8IVN8 264 aa10.87□□□□□ -0.67
SPTLC2-201ENST00000216484 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-201ENST00000216484 DAZAP2Q15038 168 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-201ENST00000216484 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
SPTLC2-201ENST00000216484 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
SPTLC2-201ENST00000216484 LST1O00453 97 aa10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 GDF5OSQ5U4N7 250 aa10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 SPINT4Q6UDR6 99 aa10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 LINC00482Q8N8I6 264 aa10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 M0QY20 66 aa10.86□□□□□ -0.67
SPTLC2-201ENST00000216484 TRBV7-7A0A0K0K1E9 115 aa10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 PCSK5Q92824 1860 aa10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 BBC3Q96PG8 261 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 Q8N7P7 452 aa10.85□□□□□ -0.67
SPTLC2-201ENST00000216484 TRAV10A0A0B4J240 114 aa10.84□□□□□ -0.67
SPTLC2-201ENST00000216484 IGLV2-14P01704 120 aa10.83□□□□□ -0.67
SPTLC2-201ENST00000216484 C7orf65Q6ZTY9 151 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 CCDC140Q96MF4 163 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 U3KQA8 63 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 NRACQ8N912 160 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 REG3GQ6UW15 175 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 C1orf137Q5JT78 98 aa10.83□□□□□ -0.68
SPTLC2-201ENST00000216484 TLN1Q9Y490 2541 aaKnown RBP10.82□□□□□ -0.68
SPTLC2-201ENST00000216484 XGP55808 180 aa10.82□□□□□ -0.68
SPTLC2-201ENST00000216484 Q6JHZ5 121 aa10.82□□□□□ -0.68
SPTLC2-201ENST00000216484 PIEZO2Q9H5I5 2752 aa10.81□□□□□ -0.68
SPTLC2-201ENST00000216484 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
SPTLC2-201ENST00000216484 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
SPTLC2-201ENST00000216484 Q6ZSR3 168 aa10.81□□□□□ -0.68
SPTLC2-201ENST00000216484 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
SPTLC2-201ENST00000216484 RBX1P62877 108 aa10.8□□□□□ -0.68
SPTLC2-201ENST00000216484 NTM-AS1Q6ZSK4 140 aa10.8□□□□□ -0.68
SPTLC2-201ENST00000216484 ADORA2A-AS1P86434 159 aa10.8□□□□□ -0.68
SPTLC2-201ENST00000216484 COL27A1Q8IZC6 1860 aaPredicted RBP10.79□□□□□ -0.68
SPTLC2-201ENST00000216484 RNASE3P12724 160 aaKnown RBP10.78□□□□□ -0.68
SPTLC2-201ENST00000216484 LELP1Q5T871 98 aa10.78□□□□□ -0.68
SPTLC2-201ENST00000216484 NUPR2A6NF83 97 aa10.78□□□□□ -0.68
SPTLC2-201ENST00000216484 Q8N814 137 aa10.78□□□□□ -0.68
SPTLC2-201ENST00000216484 LINC00575Q6W349 94 aa10.78□□□□□ -0.68
SPTLC2-201ENST00000216484 LINC00959A0A1B0GUT2 108 aa10.77□□□□□ -0.68
SPTLC2-201ENST00000216484 A0A1B0GU69 56 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 INAFM1C9JVW0 142 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 IGLV1-47P01700 117 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 PIEZO1Q92508 2521 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 Q8N3U1 123 aa10.77□□□□□ -0.69
SPTLC2-201ENST00000216484 TNFRSF13BO14836 293 aaPredicted RBP10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 K7EQG2 157 aa10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 Q6ZS46 218 aa10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 Q9UF83 564 aa10.76□□□□□ -0.69
SPTLC2-201ENST00000216484 TSHBP01222 138 aa10.75□□□□□ -0.69
SPTLC2-201ENST00000216484 MBD6Q96DN6 1003 aa10.75□□□□□ -0.69
SPTLC2-201ENST00000216484 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
SPTLC2-201ENST00000216484 PLA2G2CQ5R387 149 aa10.75□□□□□ -0.69
SPTLC2-201ENST00000216484 KRTAP27-1Q3LI81 207 aa10.75□□□□□ -0.69
SPTLC2-201ENST00000216484 IGLV5-52A0A0A0MRZ9 124 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 CRIP1P50238 77 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 U3KQK5 164 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 CYSRT1A8MQ03 144 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 MSMPQ1L6U9 139 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 A0A087WVE0 104 aa10.74□□□□□ -0.69
SPTLC2-201ENST00000216484 C2orf91Q6ZV80 131 aa10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 PRR3P79522 188 aaKnown RBP10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 C9orf116Q5BN46 136 aaPredicted RBP10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 Q9BRP9 147 aa10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 LINC01556Q5JQF7 62 aa10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
SPTLC2-201ENST00000216484 HCG22E2RYF7 251 aa10.72□□□□□ -0.69
SPTLC2-201ENST00000216484 PRM2P04554 102 aa10.72□□□□□ -0.69
SPTLC2-201ENST00000216484 Q6YL49 198 aa10.72□□□□□ -0.69
SPTLC2-201ENST00000216484 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
SPTLC2-201ENST00000216484 Q8IZM0 81 aa10.71□□□□□ -0.69
SPTLC2-201ENST00000216484 A0A087WYN8 130 aa10.71□□□□□ -0.69
SPTLC2-201ENST00000216484 YPEL4Q96NS1 127 aa10.71□□□□□ -0.7
SPTLC2-201ENST00000216484 hDV103S1A0JD37 113 aa10.71□□□□□ -0.7
SPTLC2-201ENST00000216484 IGLV8-61A0A075B6I0 122 aa10.7□□□□□ -0.7
SPTLC2-201ENST00000216484 ZNF462Q96JM2 2506 aa10.7□□□□□ -0.7
SPTLC2-201ENST00000216484 CR1P17927 2039 aa10.69□□□□□ -0.7
SPTLC2-201ENST00000216484 PLA2G5P39877 138 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms