RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Ighv14-1A0A075B5R4 117 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 P18526 117 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Hint1P70349 126 aaKnown RBP5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Spink2Q8BMY7 86 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Dtx2Q8R3P2 619 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Gnb1lQ9EQ15 326 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 G6pc2Q9Z186 355 aa5.41□□□□□ -1.54
Scn1a-201ENSMUST00000077489 MalO09198 153 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Znf260Q62513 407 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Apc2Q9Z1K7 2274 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Tcrg-C1A0A075B5Z0 172 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Gm20878L7N244 103 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Tcrg-C3L7N479 172 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Gtsf1lQ9CWD0 151 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Plxna1P70206 1894 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Ighv1-7A0A075B5T7 117 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Ly6lH3BJG9 140 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Igh-VJ558P01758 117 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Iglc2P01844 104 aa5.4□□□□□ -1.54
Scn1a-201ENSMUST00000077489 Ighv1-22A0A075B5U7 117 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ighv5-12-4A0A0A6YWG4 117 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Defa-rs7P50715 91 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 AtraidQ6PGD0 223 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Il19Q8CJ70 176 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gtf3aQ8VHT7 364 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Mrps11Q9DCA2 191 aaKnown RBP5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Scn10aQ6QIY3 1958 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hist1h2bfP10853 126 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Cox8bP48772 70 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hist1h2bbQ64475 126 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Usmg5Q78IK2 58 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 EpopQ7TNS8 369 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hist1h2bkQ8CGP1 126 aaKnown RBP5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hist1h2bpQ8CGP2 126 aaKnown RBP5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Slc25a15Q9WVD5 301 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Igkv14-130A0A0G2JF45 117 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm867A0A1W2P7T4 151 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Znf431E9QAG8 526 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Klrd1O54707 179 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Pate2Q3UW31 111 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm10775Q3V290 127 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 SprnQ8BWU1 147 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 BC049762Q8C601 163 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Vmn1r197Q8R265 298 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ssbp1Q9CYR0 152 aaKnown RBP5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Opn3Q9WUK7 400 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Trdv5A0A075B661 115 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hbb-bsA8DUK4 147 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Zfp648D3Z0W3 525 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm10203F6QJ09 66 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hbb-b1P02088 147 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Egr1P08046 533 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 P18532 116 aa5.4□□□□□ -1.55
Scn1a-201ENSMUST00000077489 PoleQ9WVF7 2283 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Igkv9-123A0A140T8N8 117 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Il2raP01590 268 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 SbpP15501 199 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Pradc1Q9D9N8 188 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Slamf6Q9ET39 351 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 OtorQ9JIE3 128 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ccpg1osV9GXK1 122 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 P01725 110 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Zfp36l2P23949 484 aaKnown RBP5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Wbp1P97764 304 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Defa23Q5G866 93 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 NmbQ9CR53 121 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Tmem167aQ9CR64 72 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ighv7-2A0A0A6YX91 119 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm10439A2AJU2 433 aaKnown RBP5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm15114B1B0X6 433 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 P01655 112 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 YrdcQ3U5F4 280 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 C1qtnf5Q8K479 243 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Obox1Q9D350 204 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 P03985 172 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Supt4h1aP63271 117 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ttc9cQ810A3 171 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Med12lQ8BQM9 2157 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Q9D727 114 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ighv7-3A0A075B5R2 120 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 1500009C09RikD3YYW9 81 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Pax9P47242 342 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 H2-DMb2Q31099 261 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Znf474Q6V5K9 347 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hils1Q9QYL0 170 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ighv1-26A0A075B5V0 117 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Gm35549A0A0N4SUS7 141 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Folr2Q05685 251 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Pxt1Q8K459 51 aa5.39□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Ighv1-34A0A075B5V2 117 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Igkv13-85A0A075B666 115 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Igkv6-23A0A140T8N5 115 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Hs3st6Q5GFD5 342 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 OtosQ8R448 89 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 MNCb-2875Q9DCB3 74 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Tnfrsf26P83626 204 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Zg16Q8K0C5 167 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Trav21-dv12A0A075B6C4 109 aa5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Vdac2Q60930 295 aaKnown RBP5.38□□□□□ -1.55
Scn1a-201ENSMUST00000077489 Olfr33Q8VGX7 318 aa5.38□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms